Asparagus officinalis (garden asparagus): 109829147
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Entry
109829147 CDS
T05243
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109829147
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aof01002
]
109829147
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109829147
04121 Ubiquitin system [BR:
aof04121
]
109829147
Enzymes [BR:
aof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109829147
Peptidases and inhibitors [BR:
aof01002
]
Metallo peptidases
Family M67
109829147
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Others
Others
109829147
Ubiquitin system [BR:
aof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
109829147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Hox9_act
Motif
Other DBs
NCBI-GeneID:
109829147
NCBI-ProteinID:
XP_020251866
LinkDB
All DBs
Position
1:complement(116824329..116842379)
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AA seq
508 aa
AA seq
DB search
MRSEFSLAASAPRLDIDNRISLRYYYRIARALIKQADIFRDEKNIIDLYVMLLRFSSLIT
ETIPLHREYEAYLQNERLFFRKKLLHVLDELEALKPDAQRRIEELNRKSRNQVGRWGQAN
QNSFTNNSLEWPSTKKQTSRNEVKQIYWVPGQDDSRGPINQHYRLPQSKPIDGQFHKLSL
NIPRPKEETLSRHSILGPNGLHGHWQPPIPSRGIQYPSNLDLTPVDIPSLLQPTQDEHST
AKVNVASEHVKSALEEVLSLHDDGATVHAEEPTSLITFDIMETTPKMDIPREPSPPPVRA
EVQDLAAITSEISYPTSGQTNSLEDVRTESPLQVHISAVLMDSFMRVAKSNTDRNLETCG
VLAGSLKNRNFFVTALIIPKQESTSDSCSTTNEEEIFEFQDKQSLFTLGWIHTHPTQSCF
MSSIDVHTHYSYQIMLPEAIAIVMAPRDGSRTHGIFRLTAPGGMSVIRQCQQRGFHPHPE
PLDGGPIYDRCSDVYMNPKLKFDVVDLR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggagttcagcctcgctgcgagcgctccgaggctcgacatcgacaatcggatc
tctctgcggtactactatcggattgcccgtgctctgatcaaacaggctgacattttccgg
gatgaaaagaatattattgatctttatgtcatgcttttgcgcttttcaagtctgattact
gagaccataccattgcatagagaatacgaagcatatctacaaaatgagagactattcttt
aggaagaaattacttcacgtactagatgaactagaggctttaaagccagatgcccagcgg
cggattgaagaattaaacaggaagtccagaaatcaagttggaaggtggggtcaagctaac
caaaattcttttaccaacaattcattggagtggccttcaaccaagaagcagacttcaaga
aacgaggttaaacagatttactgggttcctggacaagatgactctaggggtccaatcaat
cagcattacagactacctcagtccaagcctatagacggacaatttcacaaactttctctt
aacattcctcgtcctaaggaggagacattatcaagacattccatcttaggtccaaatggc
ctccatggacattggcaaccacctattcctagtcgagggattcaatatccaagcaatctt
gatttgactccagttgacattccaagcctccttcagccgacacaagatgaacattcaact
gcaaaagtgaatgttgcttcagagcatgtcaagtctgcacttgaagaagtcctttcgttg
catgatgatggagcaacggtacatgctgaagaaccaacttcgctgattacctttgatatc
atggaaactactcctaagatggatatccccagagaaccttctcctccgcctgttcgtgca
gaagtacaagatttggctgctatcacatctgaaatttcgtaccctacatctggacagaca
aattctcttgaggatgtccgcacagaatctcctttgcaagttcacatttctgcggtgttg
atggacagctttatgagggttgctaagtcaaatactgatagaaacttagaaacttgtgga
gttcttgcaggttcacttaaaaatagaaatttttttgtaacagctcttatcatcccaaaa
caggagtcaacctctgattcttgttcaacgacaaatgaggaggaaatatttgagtttcag
gataagcaatctcttttcaccctcgggtggattcacacacatcctacacagtcgtgtttc
atgtcgtcgatcgatgttcacacccattattcttatcagattatgttacctgaagccatt
gcaattgttatggcaccaagagatggttcaaggacacatggtatatttaggcttacagct
cctggtggcatgtcggtaataaggcaatgccagcagcgcggtttccatcctcatccagag
ccattggatggcggtccaatctatgaccgctgttccgatgtatacatgaatcctaaactc
aaatttgatgttgtagatctcagatga
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