Asparagus officinalis (garden asparagus): 109829176
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Entry
109829176 CDS
T05243
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109829176
03015 mRNA surveillance pathway
109829176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109829176
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109829176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
109829176
NCBI-ProteinID:
XP_020251908
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Position
1:118640600..118664095
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AA seq
633 aa
AA seq
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MGFIKLEPRCPQRSAIVASVDPEPNWTMNDLLTELNTLEEKLGYHSPSPLKQPPPGYQEI
LKVEELVSRGHKPFVMSISDDDTSGDDDAESYGESEDEVSEAKSLVAGARFSCNDLDFSD
SEASEEELDINSTQSFLMHKNSLEEGTLFELEREHQQKVKEQVRSTLSALELDYEKNCYR
SQHAVLQIEKYIEERRETDRSLDKQYRCKIAEVLDSHLSAIQRDHQKRSLIEEQRIKDDA
AIEEAKRKEKAIYEEEVRREKAKAEAEAREKAAKLAEERRLALETAKKEAQEAARKEAER
AAAEAAEKAAQNKVGSSAQNARERKEGSSSSDESGIKVMAADAALKSEANRLRIYNDVAK
EIPSIPQKEFEKYGRKMFRIVSQITGTVEAVRSKAQDFISTINGSVLPHPISILVFAQKI
VSFCETPRGNDDRFAFACACVILLVSSEVPVAMDFVLAELHKACIYTVPKHLHPSKPDAQ
SKDYWKMIGYREEDSKLESSQSYLKRLQPYMKLYAALVQTDMQGIRNPHGLEHGWAWLAM
FLNTLPANRSTAFALDAFLRMTGFALYRRYKSQFIKILDVISRSYLPALKKRDDQKLGEI
VNRLEGYLDDKAYLKEPEGWRLQEGYLLSEEFV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcataaaattggagcctcgatgccctcagagatcggcgatagtggcttccgta
gatccagagcctaattggactatgaatgatcttttgactgagcttaatacgttggaggaa
aagctcgggtatcactcgccctcgcctcttaagcaaccaccccctgggtaccaggagatt
ttaaaagtggaggagctggtttcacgaggtcataagccatttgtcatgagcatctctgat
gatgatacgagtggtgacgatgatgcagaaagttatggtgaaagtgaggatgaagtaagt
gaagctaagagtttggtggccggggctcggttttcttgcaacgatcttgattttagtgat
tcggaagcatctgaggaggagttagatattaattcaactcaaagttttttgatgcacaaa
aatagcttggaagaaggtactctttttgaacttgaaagggagcaccaacaaaaagtcaag
gagcaagtaaggagtacattatctgcactggaattagattatgaaaagaactgctacaga
tcgcagcatgctgttcttcagatagagaaatatatagaagaaagacgtgagactgacaga
agtctggataagcaatatcggtgcaagattgctgaagtacttgatagccacctctctgct
atccaaagggatcatcaaaagagatccctgattgaggagcaaagaataaaagacgatgcg
gctattgaagaagccaaacggaaagaaaaagctatatatgaggaagaagtgaggcgagaa
aaggctaaggccgaagcagaggcgagagaaaaagctgcaaaattagcagaagaacgaaga
ttagctctcgaaactgcaaaaaaggaggctcaagaagctgcaagaaaggaagctgagaga
gctgctgcagaagctgcagaaaaggcagctcagaataaggtcggtagtagtgcacaaaat
gcaagagaaagaaaggaaggaagttcatcttctgatgaatcagggattaaagttatggct
gctgacgctgcacttaagtcagaggcaaacagactaagaatatacaatgatgttgccaaa
gagattcctagtatacctcagaaggaatttgaaaaatatggacgaaagatgtttaggata
gtaagccaaataaccgggaccgttgaggctgtcagatctaaagcacaagatttcataagc
acgattaatggctcagtattacctcatcctatctccatcttggtctttgcgcaaaagatt
gtttccttctgtgaaaccccaaggggaaatgatgatcgatttgctttcgcttgcgcctgt
gttattctccttgtttcttccgaggtgcctgttgcgatggattttgtactggctgaattg
cataaagcctgtatctacacagttcctaagcatctccatccttcaaagcctgatgcacaa
agtaaagattactggaaaatgattggttatcgtgaagaagacagcaagttggaaagctca
cagagttacttgaaacgtttacagccttatatgaaactatacgctgctcttgttcagact
gatatgcaaggtattagaaatcctcatggcctagaacatggatgggcgtggcttgcaatg
ttcctgaacacacttcctgctaatagatctactgccttcgctttggatgccttcctgagg
atgacaggatttgcactatacagacgatacaagtctcagttcattaagatacttgatgta
atttcacgtagctatttgcctgcattaaagaaacgagatgatcagaagttgggagagatt
gtgaataggttagagggataccttgatgataaagcttatttaaaagagcctgagggttgg
cgtctccaagaaggttatcttctatctgaagaattcgtgtaa
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