Asparagus officinalis (garden asparagus): 109829659
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Entry
109829659 CDS
T05243
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109829659
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109829659
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109829659
NCBI-ProteinID:
XP_020252296
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Position
2:complement(3111133..3114716)
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AA seq
315 aa
AA seq
DB search
FGRNAVGGLHGDVYRVTSLKDDGCGSLREGCRRAKPLWIIFAVSGTIRLSSPLRVSSYKT
IDGRGQKIKLTGKGLQLRECEHVIICNLQFEGGTGPDADAIQIKPKSRHIWIDRCSLSNF
SDGLIDITRESTDITVSRCRLSNHDKAMLIGAGCNDCNDRCIRVTIHHCFFNGTRQRHPR
VRFGKVHLYNNYTRNWGIYAVCASVESQIVSQCNIYEAGQKKVVFKYLTEKAADRDHGSS
GFVKSEGDLFLNGAQPCPANGSGGERVFKVQDHYPKWTMERASVALKEALQVCTGWQAVP
IPADKSGAIRGAAAT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
tttggaagaaatgccgttggcgggcttcatggagatgtgtatcgggttacgagcttgaaa
gatgacggatgtggctcacttcgagaaggttgccgtagagccaaaccactctggataatc
tttgcggtttcggggacaattcgcctctcgtcacctctgagggtatcatcttataagacg
atcgatggccgaggccagaagattaagctgacggggaaaggcttgcagctgagagagtgt
gagcatgtcattatttgcaacctgcagtttgaagggggtacgggacctgatgctgatgca
atccagataaaaccaaagtccaggcatatttggatagaccgttgcagtttgagtaacttc
agcgatggtttgattgacatcacacgcgaaagtacggatatcacagtttcaagatgccgc
ctttccaatcatgataaagcaatgcttatcggagctggttgcaatgactgcaacgacaga
tgcattcgtgttacaattcatcattgcttttttaatggcacgcggcagcgacatcctcgt
gttagatttggcaaagttcacctttacaacaactacaccagaaattggggcatatacgca
gtttgtgcgagtgttgaatcacagattgtctcacagtgcaatatatacgaagctgggcag
aagaaggttgtgtttaaatatctgacagaaaaggcagcagatagagaccatggcagcagt
ggatttgtgaagtcggaaggtgacctattcctgaatggtgctcaaccttgtcctgcgaat
ggctccggtggagaacgcgtcttcaaggtccaggatcactacccaaaatggactatggag
cgtgcatctgttgctctcaaagaagctctccaggtgtgcactggatggcaggctgtcccg
atacctgcggacaaatctggtgctatcagaggtgctgccgctacttga
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