KEGG   Asparagus officinalis (garden asparagus): 109829937
Entry
109829937         CDS       T05243                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109829937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109829937
   03041 Spliceosome [BR:aof03041]
    109829937
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109829937
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109829937
Spliceosome [BR:aof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109829937
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 109829937
NCBI-ProteinID: XP_020252630
LinkDB
Position
1:complement(6858115..6862646)
AA seq 374 aa
MDLSSKKRKADENDPLTVKLFRRASAGRHTSLLRSVFSPYGEIKEAIVICDKITGKSKGY
GFVTYVHADAAILALKEPSKKIDGRVTVTNLAAAGNAGAGPAAGAVAVPAATVDVSQRKV
FVGNVPYDMPSDRLLSVFSSFGEIEEGPLGFDKHTGKFRGYALFVYKTVEGARAAVAEPR
RIVDGQLMEVKYANEGKKKPGMGDNKPATVAENKPVDGIMVGRKRRLSSYGRFYPSSALS
GFSGAGGLGSHGINSPLQSSIGSGSTGQVPSSHSGGAGLGSFGSGGGFGGPYGSSSQFSG
GSGSGGYGGFGMGSSLYNNRLPASSGGMGSGAFSEGGPYSSLGHSGQHLQSAGSPPGPRI
PSGGGMYQGLPPYY
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggatctctcctccaagaaacggaaagccgacgagaacgacccgctgaccgtgaagctc
tttcgtcgcgcctcggctgggagacacaccagcctcctccgctccgtcttctccccctac
ggagagatcaaggaagccatcgtcatctgcgataagatcacgggcaagtcgaaaggttac
ggctttgtcacttacgttcacgctgacgcggcgattcttgcactaaaggagcctagcaag
aagattgatggtcgggttactgtgactaatctcgctgctgcggggaacgctggagcggga
cctgctgcgggggctgtggcggtgccggcggcgaccgtggatgtctcgcagaggaaggtg
tttgttgggaatgtgccgtatgatatgccgtcagatcgattgctgtcggtgttctcgagc
tttggggagattgaggaggggccgttggggtttgataagcacacggggaagtttagaggg
tatgcactttttgtgtataagactgtggagggtgctcgagctgcggttgctgagcccagg
aggatagttgatgggcagttgatggaagttaagtatgcgaatgaaggaaagaagaagccg
gggatgggtgataataaacctgcgactgttgcagagaataagcctgtggatggaattatg
gtgggccggaagcgccggttgtcctcgtatggcaggttctacccttctagtgcgctcagt
gggttctcgggggccggtggtttggggagtcacggtataaactcaccattgcaatcttcg
atcggttcaggatcaacagggcaagttccttcgtcgcatagtgggggggctggacttggt
agttttggaagtggtggaggttttggaggtccttatgggtcttcatcgcagttttcagga
ggttctggttcaggtggttatggtggttttgggatggggtcttcgctctataacaatagg
ctgccagctagttcgggtgggatggggtctggtgcgttttcagagggtgggccttattcg
tccttggggcattctggtcagcatcttcaatctgcaggctcaccaccgggacctagaatt
ccgtctggtggtgggatgtatcaaggcctgccaccttattattga

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