Asparagus officinalis (garden asparagus): 109829956
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Entry
109829956 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109829956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109829956
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109829956
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
HECT type E3
109829956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
109829956
NCBI-ProteinID:
XP_020252650
LinkDB
All DBs
Position
2:3534497..3544215
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AA seq
1395 aa
AA seq
DB search
MATAGPLLVKLANYEGNPEIMLLAVRALTYLCDLVPRSADELVRHEVVPVLCGKLLAIEY
LDLAEQCLQALEKISKKQPVPCLQAGTISAVLSYIDFFSTSVQRVALSTVANVCKKLPLD
CSSLVMKSVPALCNLLQYEDRKLVETVATCLIRITESFSSSSELLDELCSCGMINKMLRL
VAVDGQVSLSQTTYVGLIGLLTKLASKSLLAVRTLFDLNISNILRGILVASDTSHGTPYS
PLQDTQPNQVQEVLKLLNQLIPSTSRDSEDIQLVLAKEKVIADEPLFLHQFSANILPAAI
QLVNSGVNLYVCYCCVSIINNIVYFSTSDMLLDLLKNTNISSFLAGLLARKHEHVLFLTL
KIVETLMQKLSGVFSSPFIKEGVIYAIDALLIQNDCSQSLSQQSSCSGSRLVVRDSSRCL
CNAFNVCYSSSETKTCRLGKDAVRNLAGHIKATYFHNESANCGMGLTEILKKLKTYCAEL
DDNGNKYLTNDVAEKEDYLSDILGQVLRELSSGDTMSTFEFIESGVVKSLAHYLCNGRYL
QGYTGSHNSLNHSLSVLTRFQTFAAISLSNSGMTWEDLPLTSFVRKLQSALSSVDNFPVI
LSHNFKPRNVLVDIPVKHTTMNPCLRVRFIREEGEESIGDCSEVLTVELSCTLDVIEGYL
WPKINGNKNHRQAEPTGEDIESVDFASGSPCPVGRNHEDASANIVQKRPISDLPEILNFQ
GQTLLVDTGAKTGEIIIEKKSRPSSSSQRCGQNRKDLTSSKYDEHPNLIFAFEGKHLNRS
LTLYQAILQSQIKVEPDMCLGPKFWNDIHKVTYKRAEPMMSCAKLSSDTSESYLFWEKIG
FSWHKLSFFSSLLLAELPCKLDRLNPSYDILFMMKILEGLNRNSFQLLSNDKSIAFAQGR
IKNVDDLSVVTSTIPQTQFISTKLTDKLEQQMQDPLALTTGGLPLWCYELTAVCPFLFSF
EAKRKYFRLAVFGSSENQYPRQMHSSNSSSISNNERWSQTGLSQRKKFKVDRNNILESAA
KMMGSLAHSKAVIEVEYNEEVGTGLGPTMEFYTLVSREFQKNGLGIWREDRSTSINGSEF
VVAPFGLFPRPWSMQTSVSNGIHFSDVIRKFFLLGQLVAEAIKDKRMLDIPFSRAFYKVI
LEQEIGIYDIQSFDPELGKTLLEFQALVNRKRYLVSDPRVNKGDPFYLCFRNTRIEDLCL
DFTLPGYSDYLLTSGSDPRLVAIDNLEEYVKLVVNATIKDGISRQVEAFKSGFNEVFPLK
DLQMFTEGELERLLCGERDTWDFGQLLDHIKFDHGYTASSTSITNLLEIIQSFGCDERRA
FLQFVTGAPRLPPGGLAALNPKMTIVRKHCTNDMDLPSVMTCANYLKLPSYSSKEKMRQR
LLYAITEGQGSFHLS
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggggcctttgcttgtgaaattggctaattatgaggggaaccctgagatt
atgctgctggcggttagggctttgacgtatttgtgtgatttggtgccgaggtcggctgat
gagctggtcaggcacgaggttgtgcccgtgctttgtgggaagttgctggcgatcgagtac
ttggatttagctgaacagtgtttgcaagcattggagaagatttcgaagaagcagccggtt
ccctgcttgcaggctgggacgatatcggcagttttgagttatattgatttcttctctact
agtgtgcagagggttgccctgtctacggttgcaaatgtgtgcaaaaagctacctttggat
tgctcttcgcttgtcatgaaatctgtccctgcattgtgcaatctcctccaatacgaggac
cggaagctagtggagactgttgcaacttgcttgataaggataacagaaagttttagtagt
tcttcggagcttctggatgagctttgctcatgtgggatgattaacaagatgttacgttta
gttgctgttgatggtcaggtgtctcttagccaaacgacttacgtgggattgattgggctt
ctcactaagcttgccagtaaatcactattggcagtaaggactttgtttgatctgaatata
agcaacatactgaggggtatcttggtggcttctgacacgtctcatggcaccccatactca
cccctccaggacacgcaacctaaccaggttcaggaagttttgaagttattgaaccagttg
atcccttccacatctagggacagtgaggacattcagctagttttggccaaggaaaaagta
atagcagatgaacccctgttcttgcatcagttctcagcaaatatcctccctgctgcaatt
cagttggtcaactctggcgtgaatctttatgtttgttactgctgtgtttccatcataaac
aatattgtttattttagcacgtctgacatgctcttggatttgctcaagaatacaaacatt
tccagctttttggctggcttgttggcaagaaaacatgaacatgtgctctttctgactcta
aaaattgtagagactctcatgcaaaagctttcgggtgtattttcaagcccttttattaaa
gagggcgttatttatgcaattgatgcacttctgatacaaaatgattgttctcagtccctg
tctcaacaatccagttgttctggcagtcgattggtggtcagagattcttctaggtgcttg
tgcaacgcgtttaatgtgtgctactcttcttctgaaacaaaaacatgtaggcttgggaaa
gatgctgtccgtaatttagcagggcacataaaggctacatactttcataatgaatcagcc
aattgtgggatgggtttgactgaaattttaaagaaactcaaaacatactgtgcagaactt
gatgataatggtaacaagtatttaacgaatgatgttgctgaaaaagaggactacttatct
gatatactaggtcaagttttgagagagcttagtagtggagacacaatgtccacttttgag
ttcattgagagcggagtagtgaaatctttggcacattatttatgcaatgggagatacctt
caaggatatactggtagtcacaactcactaaatcattctctttctgtgcttacaagattc
cagacttttgctgctatttctttgtctaactcggggatgacttgggaagatttgccgctg
acatcatttgtaagaaaattgcagagtgcattgtcttctgttgataattttcctgttata
ttgagccataatttcaagccacggaatgttcttgttgatatcccagtcaaacacactaca
atgaatccttgcttaagagttcgttttattagggaagaaggagaggaaagcataggtgac
tgtagtgaagttctgactgttgagctatcgtgcacattggatgtcattgaaggatatcta
tggcccaaaatcaatggaaacaaaaaccataggcaggcagaaccaacaggggaggatatt
gaatcagttgactttgcttctggaagtccatgtcctgttgggagaaatcatgaagatgca
agtgccaatatagtccagaagcgaccaatatcagatttaccagagattctaaactttcaa
ggacagactttactggtggatactggtgcaaaaacaggggagatcataattgagaagaaa
tccagaccttcatcctctagtcagagatgtggccagaacagaaaagatttaacttcaagc
aaatatgatgagcatccaaatttgatttttgcttttgaagggaaacatttgaatcggtct
ttaactctttatcaagcaattctacaaagccagatcaaggtagaacctgatatgtgtttg
ggcccaaagttctggaatgatattcacaaagtgacatacaaacgagcagagccaatgatg
agctgtgcaaaactgtcttctgacacttctgagtcatatctattttgggaaaagattgga
ttctcatggcataagttgtcattcttttccagtttgcttctagctgagcttccatgcaaa
cttgataggttaaatccgtcatatgatatacttttcatgatgaaaatcttggaagggcta
aaccgtaattcatttcagctgttgtccaatgataaaagcattgcgtttgctcaaggcaga
ataaaaaacgttgatgatctaagtgtggtgacttctacaattccacagacccagtttata
agtactaaactcactgataagctcgagcagcaaatgcaagatcctttggcattaaccact
ggtggcctgcctctatggtgttacgagctaacagctgtgtgcccctttttgttttctttt
gaagcaaaacggaagtacttccgactggctgtatttggttcctctgagaatcagtatcct
agacagatgcattcaagcaacagcagttccatttccaataatgagcgttggtcacaaaca
gggttgtctcaacgcaaaaagttcaaagtagatcgcaataatattctggaatctgctgca
aaaatgatgggatcacttgctcatagcaaggctgttattgaagtggaatacaatgaagaa
gttggaactggtctaggtccaactatggagttttacacattggtcagtcgtgaatttcag
aaaaatggtttgggtatttggagagaggatagaagtactagtattaatgggtctgaattt
gttgttgctccttttggattgtttcctcgcccctggtcaatgcaaacaagtgtctcaaat
ggtatccatttttctgatgtgatcagaaagttctttcttcttgggcagctcgtagcagag
gcaattaaagataagaggatgttggatattccattttctagagcgttttataaagttatc
ctggagcaggagattggcatatatgatattcagtcattcgatcctgagctgggaaagaca
ttgttagagtttcaagctcttgttaataggaaacgatatttggtatcagatccaagagta
aataaaggggatcccttctatttatgtttccggaatacaagaatagaagacctctgcctt
gattttacacttccaggctactccgattatctactaaccagtggaagtgatcctagattg
gttgctattgataacctggaagagtatgtcaaactagtcgtcaatgcaactatcaaagat
ggaatttccagacaagttgaagcttttaaatcaggttttaatgaggtattcccattgaaa
gaccttcaaatgtttactgaaggtgaactcgaacgtttactttgtggggaacgggacact
tgggattttggccagcttcttgatcacatcaagtttgaccatggttacactgccagcagt
acttctatcacaaatttgctagaaatcatacaaagcttcggatgtgatgagcgaagagct
ttcctccagtttgttactggtgctcctcgacttcctccaggaggcttagctgctttgaac
cctaaaatgacaattgtccgtaagcattgcaccaatgacatggacttgccaagcgtgatg
acctgcgctaattacctgaagctcccatcttactcttccaaggagaaaatgagacaaagg
cttttatatgcaataactgaaggacagggttctttccacctctcttga
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