Asparagus officinalis (garden asparagus): 109830116
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Entry
109830116 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109830116
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109830116
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109830116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
Prok-RING_4
Zn_ribbon_6
zf-RING_4
zf-Nse
zf-ANAPC11
zf-RING_10
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
109830116
NCBI-ProteinID:
XP_020252862
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All DBs
Position
2:7842745..7849207
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AA seq
203 aa
AA seq
DB search
MSTNSSSKRCTRRSSRVSPAEAVPRTAAQSSRPHLEASDDEVQMWSSPRRIPQARNQSRR
RNRPVIVVVDDERESHSGTRGIRVNGPVTVATVNHRNKRQRIPPNRTIINCENYPISEDG
PSSKSKKVSTPVPEKVVPKEPTFGCPICMGPIVSPCSTSCGHIFCEGCIKSAIEVKRLCP
TCRTKLAKKNSFHKVFLPSATND
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaattcgtcttcaaagcgatgcacgaggaggagctccagggtttctcctgca
gaggctgtccccagaactgcggctcagagttcgcgccctcatcttgaagccagcgatgat
gaggttcagatgtggtcctctccgagaagaattcctcaggcgaggaatcaatctaggagg
agaaatcgtcctgtgattgtagttgtagatgatgagagagaaagtcattcagggactcga
gggatacgtgtaaatggtcctgtaactgtggccaccgtcaatcatcgaaacaagcgtcaa
aggattccaccaaacagaaccattattaattgcgaaaattatccaatatctgaagatggt
ccaagttccaagagcaaaaaagtgagcacgccagtgccggaaaaggtggtaccgaaggag
ccaactttcggttgccctatttgcatgggcccgatagtttcaccatgctcaacatcttgt
ggccatatcttttgtgaaggttgcatcaagtctgcgatcgaagtgaagaggctatgcccc
acctgcaggaccaaactggcaaagaaaaacagctttcacaaagtgttccttcctagcgcc
accaacgactag
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