Asparagus officinalis (garden asparagus): 109830254
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Entry
109830254 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: ribosomal RNA processing protein 1 homolog
KO
K14849
ribosomal RNA-processing protein 1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109830254
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109830254
Protein phosphatases and associated proteins [BR:
aof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109830254
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109830254
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
CagY_M
Motif
Other DBs
NCBI-GeneID:
109830254
NCBI-ProteinID:
XP_020253057
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Position
2:11303760..11305682
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AA seq
557 aa
AA seq
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MDAAQISGAAIAKRLASCNQPARSRAVRLLVRWLPAXXXAVDSLTDGGDLIKIWKGLFYC
VWHADKLPFQLDLINRLSSLLETLDSDLTVRYFESFLLTIRREWSGIDLLRLDKFYLLIR
KFIHRMFGLLKKNDWDSDLLERLVAVLCEKSLLASDKFEASGVNYHIAEVFLDEIEGFLP
IRTETLDLLLRPFVSVLESSSNRVLVNKIKVNVFDRLAHNGVKFLNGEKNEEVEKFGKYA
LVLGFSEKFFKSASDEGTVQGNRKVLFGLHERFLKLEKDFEKSGLEISFENLGKGNEAEK
VESLGTESVQENGESESKPQKKRKKEKRASDGVAKKIKAKKKKNVHGKLEDAVNGENSLE
NNSLETKSKTKKKKKKKDFSDSASESNGVSGDATVEQDVDNGDEMGSDDLVNFDENVISN
LQKQFEKVAAEAGLDLSTTPVAERKKRKRAKSASKLASVNNEENEEKSVKKVRFSMKNNL
VWKPQTPLPPQSLRLPPSATPRGSALKKGVLPGPIRETPPTTKRINAKGSSVKKGRKCLK
GVSPSAKKILKLQNFSV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcccaaatctccggcgccgccatcgccaaacgcctagcatcctgcaaccaa
cctgcgcgcagtcgcgcggtccgcctcctcgtccggtggctccctgcnnnnnnnnnngcc
gttgactccttaaccgacggcggcgacctcatcaagatatggaaaggactcttctactgc
gtttggcacgccgacaagctcccgttccaactcgatctcatcaatcgcctctcctctctt
ctcgaaaccctagattctgatctcaccgttcggtactttgaatctttcctccttactatt
cgaagggagtggagcgggattgatcttttgagattagacaagttttatcttttaattcga
aagtttattcatcgtatgtttggtttattgaagaagaacgattgggatagtgatctgttg
gagagattagtagctgttttgtgtgaaaaatcgcttcttgctagtgataagtttgaggcg
tctggggtcaattatcacattgctgaggttttcttggatgagattgaggggtttttgcca
attcgaacggaaaccctagatttgttgctgaggccgtttgtttcggtcttggagagtagt
agtaatagggttttggtgaataagattaaggtgaatgtgtttgatagattggctcacaat
ggggttaagtttttgaatggggagaagaatgaagaagtggagaaatttgggaagtatgct
ttggttttagggttttcggagaaattcttcaagtcggcatcagatgaaggaactgttcaa
ggtaataggaaagtgttgtttggattacacgagaggtttctcaaattggagaaggatttt
gagaaatctgggcttgagatttcattcgagaatttgggaaaggggaatgaagcagaaaag
gttgaatctttgggtacagagtctgttcaagaaaatggggaatcggaatctaaacctcaa
aagaagaggaagaaggaaaagagagcttcggatggtgttgcgaaaaagatcaaggccaag
aaaaagaagaatgttcatggcaagcttgaggatgctgtaaatggagagaatagcttagaa
aacaacagcttggaaacaaagagcaagacaaagaaaaagaagaagaagaaggatttctca
gattcagcttcggaaagcaatggtgtgagtggtgatgcaacagttgaacaagatgttgat
aatggagatgagatgggtagcgacgatttggtgaattttgatgaaaatgtaatctctaat
cttcaaaaacaatttgaaaaggttgctgctgaagctggcttggatttgtccacgacacca
gttgctgagaggaagaagagaaaacgagcaaagagtgcaagcaagttggcttcagttaat
aatgaggaaaatgaggagaagagtgttaagaaagtgagattttccatgaagaacaacttg
gtttggaaacctcaaacccctttgcctcctcagagcttgagattgccaccatctgctact
ccgagaggtagtgcattgaagaaaggagtgcttcctggccctataagagaaacccctcct
acgacgaaaaggattaacgctaaaggaagctcagtgaaaaagggtcggaagtgtttgaag
ggcgtttctccatcagccaagaaaattttgaagttgcagaacttttctgtgtaa
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