Asparagus officinalis (garden asparagus): 109830329
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Entry
109830329 CDS
T05243
Name
(RefSeq) cleavage stimulating factor 64-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109830329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109830329
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109830329
U7-dependent histone pre-mRNA processing factors
109830329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
DUF8400
Motif
Other DBs
NCBI-GeneID:
109830329
NCBI-ProteinID:
XP_020253159
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Position
2
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AA seq
482 aa
AA seq
DB search
MNRSRRCKPHRDRQRRRRHRLIDMRLRASQHRCVFVGNIPYDASEEQLIQICEEVGPVVS
FRLVLDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQ
GRGGPGFTPTNEANKLSSGTPIPVDSSLHQPVGHPLAATAASTMSRALGGTQTSRLPLMQ
NGLQTLSSLGNDALTQYLAKMSRQQLNGILSEMKALVQQNKPLAQQLLQGCAQLPKALFQ
VQIMLGMVTPQMMANIKQASTPVPQPAFPNSISNQNPLVSSNLGQTRPLQQFPVQPPFQH
SLPPQPQTFGCLSNKPQIPPLSTSMSLMSQVQPPAPPHSGIPGATNVGQHPQPHLADSLQ
QPHLPPSLTSQGVSSNYQALSNGINSLSKRAGTHAAASYDLNSGVESVTQTGTTGEPSEV
MNHGLKRPKLENRGGSHQLPPEAESALLQQVMNLTPEQLSSLPLEQQQQVLQLQQMLMKQ
NL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctctcgccgctgtaaacctcatcgcgaccggcagcgccgccgccggcatcgc
ttaattgacatgcgcctccgcgcttcacagcaccgctgcgtcttcgttgggaacataccc
tacgatgcgagtgaagagcaactgatccaaatttgcgaagaagtcgggcctgttgtgtct
tttaggttagtacttgacagagaaactgggaagcccaaaggttatgggttttgtgagtat
aaggatgaggaaactgctctgagtgctcgtcgcaatctccagggttatgagataaatggc
cgtcagctaagagttgactttgctgaaaatgataagggtgctgatcgcaacagagaacag
ggtcgtggcggaccaggatttacacccactaatgaagctaataaactgtcatctggaacc
cctattcctgtggattcctctctccatcaaccagtagggcatccattagctgctactgct
gcatctaccatgtctagagcattgggtggaactcagacaagcagactgccgttaatgcaa
aatggtttacaaactctctctagtcttggcaatgatgctttgactcagtatctggcgaaa
atgtccagacagcagctgaatggaatattgtctgagatgaaggctttggttcagcaaaat
aagccgctggctcagcagctgctacaaggatgtgcacaattaccaaaggctctctttcag
gtgcaaataatgcttggtatggtgacgccacagatgatggcaaatattaagcaggcttct
actccagtcccacagcctgcatttccaaacagtatatctaatcaaaatcctttagtttct
tccaatcttggccagacacgtccacttcaacaatttcctgttcaacctccatttcagcac
tctctgccaccgcaaccacaaacttttggttgcctttcaaataagccacagattccacct
ttatcgacatccatgagtttgatgtcacaagtgcagcctcctgctcctccacattctgga
atccctggagctacaaatgttggtcagcatcctcaaccgcatcttgcggatagtcttcag
cagccacatttgccaccctctctgacttctcagggtgtctcgtcaaattaccaagcattg
tcaaatggaataaattcactttctaagcgagctggaacacatgctgctgcaagttatgat
ttaaattcaggcgtcgaatcagtgacgcagacaggaacaacaggtgaaccatcagaagtg
atgaaccatggattaaagagaccaaaattggaaaatagaggtggctctcatcagcttcca
ccagaagcggaatctgcccttcttcagcaggtgatgaatttaacacctgagcaattaagt
tcattacctctggagcagcagcagcaagtgcttcagctccaacagatgctaatgaaacag
aatttgtag
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