Asparagus officinalis (garden asparagus): 109830350
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Entry
109830350 CDS
T05243
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109830350
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
General mRNP proteins
109830350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
109830350
NCBI-ProteinID:
XP_020253185
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All DBs
Position
2:14689033..14700275
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AA seq
557 aa
AA seq
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MDFDEYDYLEKAVDDVEIRKDKKKDDEKDEKSSRRREKDGGERRSERKSSRSEDADGDKR
DDRDRSERRNKERDRESERDHRREREREKEGDRERRSKDRDYKEERDKGRDRERDREKER
EKERERERERLRRSSSRSRHEAEREMERARSRERANRERELEREIRERESRRFKEKKEAA
ELEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY
DAMSVPMAIALCGQLLLGQPVMVKPSEAEKNLVQSTATGSSGVAGAGAARKIYVGNLHFN
ISEDQLRQVFEPFGPVELVQLPLDLETGQCKGYGFVQFAQMEHAKAALSLNGKLEIAGRV
IKVSAVTDHVPVQETGANAADFDDDDGSGLSLNARSRAMLMQKLDRTGTASSIAESLGVP
LVNGVAQPNQQALPLTTNGQATLPAAPLLTSPLAAVPIGEPSECISLKNMFDPRTETDPD
FDLDIRDEVQEECSKFGPIKHIYVDKFSDGHVYLRFESVAAAASCQRAMHMRWFAGRAIS
ATFMRPYKYEAKFASGA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattacttggagaaggcggttgacgacgtcgagatccgcaag
gataagaagaaggacgacgaaaaggacgagaagagctcccgccgccgcgagaaggacggc
ggagagagaaggtcggagagaaaatcttccaggtcggaggatgccgacggagacaagcgc
gacgatcgagatcggtccgagcgcaggaacaaggagagggatcgagagagcgagagggat
caccggagggagcgcgaacgagagaaggaaggggatcgggagcgtcggagtaaggatagg
gattacaaggaagagagagacaagggcagagatagggagagggacagagagaaggagaga
gaaaaagaaagagaaagagagagggagagattgaggaggagcagcagtagatcgaggcat
gaggccgagagagagatggagagggcgaggagcagagagagggccaatagagagagggaa
ttggagcgtgagataagggagagagaaagcaggagattcaaagagaaaaaagaagccgca
gaactagaagctgatcctgaaagggaccagagaactgtttttgcttatcagatgcctttg
aaagcgacagagagagatgtttatgaattcttctcgaaagcaggaaaggttagagacgtg
cggctaatcatggatcggaactcgagacgatcaaagggagttgggtatattgagttctat
gatgcaatgtcagtgcctatggcaatagctctgtgtggtcaactccttttaggtcaacct
gtgatggtcaaaccttcagaagcagaaaagaatcttgtccaatcaactgctacaggaagc
tcaggtgttgcgggtgcaggagctgctaggaaaatttatgttgggaatcttcattttaat
atttcagaagatcaacttcgtcaggtttttgaaccttttggtccagttgaacttgtacaa
ttacctttggatctggaaactgggcagtgtaaaggttatggttttgttcaatttgcccaa
atggaacatgcgaaggcagctctaagtttgaatgggaagctagagatagccggccgggtc
atcaaggtatcagcagtcacagatcatgtccctgtacaggaaactggagcaaatgctgct
gactttgatgatgatgatggcagtggtttgtccttgaatgctcgatcaagagccatgctg
atgcagaaactcgatcgcacgggaacagcctcaagtattgctgaatctcttggagtaccc
ttggtaaatggggttgcacaaccaaatcaacaggcattacccttaactacaaatgggcag
gctacattacctgcagctccattgctaacttccccactcgccgctgtgccaattggagaa
cccagtgaatgcatttcgttaaagaatatgtttgatccaaggaccgagacggatcccgat
tttgatttggatatcagagatgaagtgcaggaagaatgttcaaaatttggccctattaag
catatctatgtggacaagtttagcgatggccatgtttatctacgatttgaaagtgtagca
gcagcagctagctgtcagcgggcaatgcatatgagatggtttgctggaagggctatatct
gccactttcatgcgaccttataaatatgaagccaaattcgcaagtggagcttaa
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