Asparagus officinalis (garden asparagus): 109830378
Help
Entry
109830378 CDS
T05243
Name
(RefSeq) autophagy-related protein 13b-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
109830378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109830378
03029 Mitochondrial biogenesis [BR:
aof03029
]
109830378
Membrane trafficking [BR:
aof04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109830378
Atg1 complex
109830378
Mitochondrial biogenesis [BR:
aof03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109830378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109830378
NCBI-ProteinID:
XP_020253217
LinkDB
All DBs
Position
2:complement(15586446..15599387)
Genome browser
AA seq
652 aa
AA seq
DB search
MASSPSSSASEPAIIEQVITEFFAKSLHIILESRSPYVSSRNYSADLFTSSPSSSSSSSS
GRPRDKWFNLALRDCPAALENFDLWRQSNLEPLVVDIILARRRTGHDEFLPSNRSEKTVE
RWVVQYESRKSSNIPREVHSSSKRSGSSSHSSEIPSMYKKTYKRTIVMLRSLYSTVRLLP
AYKVFRDLNSSGRICTLSLSHKISSFVEPFTRAEEADMKQFNFVPVDTPCGRLSLSVSYL
PSLDDVSSEPSTPISTQFIPDYVGSPTTDPLKRLHSLPSTGSLPTYISFTRRHSWSNDHG
PPSVSASPSPTYSDSRALNSTPSAGLPPRVHPHDHSPSTCPASHDSSLSAHKKNTSFDEY
WPSPPYSPSSSPSPPTHLPGSHLQSSLLRAESAPVSIPLPRLGMNSGLVTQGLPPSPSPK
SGKAGFSSKANLLRAQVTTASASQTSPESRLQLKKGSGNLHSGMTLQKILYSGKDEVGNL
SGQKLSSCSSPRIPSGSSSRFSFLDEFDDPELACPFAADDEDLVDPYRAGPADADENLAS
GQLVPVRSSDAVIGALVRMLKSAAPLRPDLPNPLTSSQTLKEGDKDVGAEKLNIASGPVT
ASGLLRSMTAADALKELKNYKQMKESFLKQGGLQSLNVQQEEIPGSQGSSEI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatccccttctagttctgcttctgaacctgctataatcgagcaagtaatcact
gaattctttgccaagagcctccacatcatacttgaatccaggtctccctatgtctcttcc
cgaaactactctgcagacctcttcacatcctctccatcatcatcctcatcttcctcaagt
ggccggccgagggacaagtggttcaacttggccttaagggattgcccagctgcactagag
aactttgacttgtggcggcagagcaatcttgaacccttggttgttgacataatcttggcc
cgtaggaggaccgggcatgatgagttcttgccaagtaacaggagtgaaaaaactgtagag
agatgggttgttcagtatgaaagcaggaaaagctccaacattccaagggaggtgcattca
agtagtaaacgaagtggtagtagctctcactcatctgagattccatctatgtataagaaa
acatacaagagaacaattgttatgcttcggtctttgtattctactgtccggcttttgcca
gcatataaagtttttcgagaccttaattcctctggccgaatttgcaccttgagcctctcc
cacaaaatatcttcttttgttgagccgttcactcgagcagaggaggcagatatgaaacag
ttcaattttgtgcctgttgacacgccctgtggaaggttatcattatcagtttcttatctt
ccatcactggacgatgtgagttctgagccttctacaccaatatcaacacagttcataccg
gattatgttgggagcccaacaactgatcctcttaagaggctgcactcgcttccatctaca
ggatcactgcctacttatatttcatttaccagaaggcatagttggagcaatgatcatgga
ccaccttccgtatctgcctcgccatcgcctacgtactctgattctcgtgctttgaattct
actccaagtgctggccttcctcctcgggttcatccacatgatcactctccatctacatgt
ccagcttcacatgactcatcgttgtcagcccataagaagaacacgagttttgatgagtat
tggccttcacctccatactcaccatcttcttccccttcaccaccaacccatttgcctggt
tcccatttgcaaagttctctgctacgggcagaaagtgccccagtcagcattcccttgccc
aggcttgggatgaatagtggattagttactcaaggtttgcctccatccccttctccaaag
agtgggaaggctggattttcctctaaggcgaatcttcttagagctcaagtgactactgct
tctgcatctcaaacttcacctgaaagtaggttacaactgaagaaaggctcgggcaacctt
catagtggcatgaccctgcagaagatattatattccgggaaagatgaagttgggaactta
tctggtcagaagttatcatcttgctcttcaccacgtatcccatctgggagctctagtaga
ttttctttcctggatgagtttgatgaccctgagcttgcctgcccatttgctgcagatgat
gaagatctagtggatccatacagggctggacctgccgatgctgatgagaatttggcatct
ggacaacttgtcccggtgaggtcctcagatgcagtgatcggtgctcttgttagaatgctc
aagtctgctgcgcctctgagaccagatctcccaaatccgttaacatcttcccaaactctg
aaggaaggagacaaggatgttggagcagagaaactaaacattgcttcaggtccggttact
gcttctggtcttttaaggtcaatgactgctgctgatgcattaaaagagctgaaaaattac
aagcagatgaaagaatcatttcttaagcaagggggtcttcagtcattaaatgttcaacaa
gaagaaattccaggttctcaaggttcatctgagatctag
DBGET
integrated database retrieval system
