Asparagus officinalis (garden asparagus): 109830415
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Entry
109830415 CDS
T05243
Name
(RefSeq) probable small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109830415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109830415
03032 DNA replication proteins [BR:
aof03032
]
109830415
Spliceosome [BR:
aof03041
]
Complex A
U1 snRNP components
Sm proteins
109830415
U2 snRNP components
109830415
Complex B
U1 snRNP components
109830415
U4/U6.U5 tri-snRNP components
109830415
Complex C
U2 snRNP components
109830415
DNA replication proteins [BR:
aof03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109830415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Rad21_Rec8_N
Motif
Other DBs
NCBI-GeneID:
109830415
NCBI-ProteinID:
XP_020253260
LinkDB
All DBs
Position
2:complement(17290312..17303307)
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AA seq
105 aa
AA seq
DB search
MEDDANAAKKEEEEFNTGPLSVLAMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgatgccaatgctgcaaagaaagaggaagaggaattcaatacgggacctctc
tctgttctggcgatgagcgtaaagaataacacacaggtgctgatcaattgccgtaacaac
aagaaacttctcggtcgtgtcagggcttttgaccgccactgcaacatggttctggaaaac
gtaagagaaatgtggactgagattccaaaaactgggaagggtaagaagaaagcactcccc
gttaacaaggacagattcatcagtaagatgtttcttcgaggggattcagttatcattgtt
ctcaggaatcctaaatga
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