KEGG   Asparagus officinalis (garden asparagus): 109830469
Entry
109830469         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC109830469
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03022  Basal transcription factors
aof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109830469
  09124 Replication and repair
   03420 Nucleotide excision repair
    109830469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109830469
   03400 DNA repair and recombination proteins [BR:aof03400]
    109830469
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109830469
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109830469
SSDB
Motif
Pfam: MAT1 DUF5962 Zf_2nd_IFT121 CPSF100_C PLU-1 MDMPI_N
Other DBs
NCBI-GeneID: 109830469
NCBI-ProteinID: XP_020253318
LinkDB
Position
2:20433853..20440942
AA seq 187 aa
MVVSSTASSFSKEMSIRRKISSIFNKREEDFPSLREYNDYLEEVEDMTFNLIEGIDVAAI
EAKIEKYRKENAEQIANAEARKAEELAAALKASKGPLHTESTDTGAAQTSQGATGGVTVQ
GQYAPSVVPGSVLAAARPTPPLAQLGGPDDEEGIEAESRMRAARAGGWTCQICKKRALEE
AFSSIWL
NT seq 564 nt   +upstreamnt  +downstreamnt
atggtggtttcgtcgaccgccagttccttctccaaagagatgagcatccgaaggaagatc
tccagcatatttaataaaagggaggaggacttcccttccttgagagaatacaatgattat
ttggaagaagttgaagatatgacctttaacttgattgaaggaatagatgttgctgcaatt
gaagctaaaattgagaaatatagaaaagagaatgctgaacagatagctaatgccgaagct
cgtaaggctgaagaactagcagctgctttgaaagcaagcaaagggccattacacactgaa
tcaactgatacaggcgctgctcaaacttctcaaggggctactggtggtgtcactgtgcaa
ggtcagtacgctcctagtgttgtaccagggagtgtacttgcggcagccaggccgacccca
cctctcgcacaattgggaggccctgatgacgaggagggtatcgaagctgagagcaggatg
agagcggcgagagctggtggttggacatgccagatttgtaagaagagggcgcttgaagaa
gctttcagtagcatatggttataa

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