Asparagus officinalis (garden asparagus): 109830568
Help
Entry
109830568 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: branchpoint-bridging protein-like
KO
K13095
splicing factor 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109830568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109830568
Spliceosome [BR:
aof03041
]
Complex A
Other components
Complex A specific factors
109830568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
RRM_5
PHD_4
KH_PNO1_2nd
zf-CCHC_2
RRM_10
RRM_7
Motif
Other DBs
NCBI-GeneID:
109830568
NCBI-ProteinID:
XP_020253457
LinkDB
All DBs
Position
2:26432643..26436768
Genome browser
AA seq
589 aa
AA seq
DB search
MKDFTADLDPEVQSLNARLLEISRLLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREF
RARERLNKERQEIISQLIRRNPAFRPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRG
NTQKRMEKETGAKIVIRGKGSIKEGRLGQKRDLKPDPAENEDLHVLVEAETQEALDAAAG
MVEKLLQPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLCGEPGHRQYACPARTSTFKSD
VLCKICGDGGHPTIDCPMKGTGKKMDDEYQNFLAELGGAAPDSQTKQSSALPIMGSGTSG
TNLPWAGGNSTQPGASNGIRKEYDETNLYIGYLPPTLDDDGLIRLFSSFGEIVMAKVIKD
KITGLSKGYGFVKYSDVAQANNAIASMNGYHLEGRTIAVRVAXPQPPPPGSYMPTSVPWG
PRVPPQYAPYAQPPPPGSSMYASVPPYGVQYPPPPPPPTSQTAASSEAMPNYPPGVQPQS
STGLVQPMPNYAYGSVPPPYPPPPMGYAPYYGVTPVPPLPSTDASQGFAIPPWAQNPQPP
SSDQSQGIANAPWSSNPPQAPPIQHVSSTEQQTTNGGDTDYEKFMSEMK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacttcactgctgatctcgatcccgaggtacagagcttgaacgcaagacttctt
gaaattagccgtcttttgcaatctggattgcccttggatgatcgccctgaaggtgctcga
tccccgtcccctgaaccgatttatgataatatgggtatcaggatcaatactagagagttc
cgagcccgcgagaggcttaataaagagagacaagagattatatctcaactcattcgtagg
aacccggcttttcgtcccccggctgattatagacctcccaagcttcagaagaaactgtac
attcccatgaaagagtacccaggctacaatttcattgggttgataattgggcctagaggg
aacacacagaagagaatggagaaggagactggggctaagattgtaattcgaggaaaagga
tcgattaaagaaggaagattggggcagaagagggacttgaagcctgaccctgcagagaat
gaagacttacacgtgttggtcgaggccgagactcaggaggcattggatgctgctgcaggg
atggtggagaagttgcttcagcctgtggatgagggtttgaacgagcataagagacagcag
ttaagagagcttgcagcattgaatgggactataagggatgatgagttttgcaggttgtgt
ggtgagcctgggcataggcagtatgcttgtcctgcgaggacttctacatttaagagtgac
gttttgtgtaagatttgtggggatggagggcatcccacaattgactgtcctatgaaaggg
accggaaagaagatggacgatgagtatcagaacttcttggccgagctcggaggagctgca
cctgactctcaaacgaaacagagctcagcattgcctataatgggttctggtacttcgggc
accaatcttccttgggctggaggaaatagtacacagcctggggcttctaatggtatcagg
aaagagtatgatgagacaaacctctacattgggtatcttccccctactcttgatgatgat
ggtctcataaggctcttctcgtctttcggtgagattgtgatggctaaggttatcaaggat
aagatcaccgggctgagcaaagggtatgggtttgtgaagtattctgatgttgcacaggca
aacaatgctattgctagtatgaatgggtatcatcttgaagggagaactatagcagtgaga
gtggcgncccctcagcctcctcccccgggaagttatatgcccacttcggttccttggggc
ccacgggttcctcctcaatatgctccatatgctcagccaccgccacctggttcaagcatg
tatgcttctgtccctccttatggagttcagtacccacctcctcctccaccaccaactagt
caaactgcggcttcaagtgaagcaatgcctaactatcctccaggagtgcagccacagtct
agtactggacttgttcagccaatgccaaactatgcatatggcagtgtaccgcctccttat
cctcctcctccaatgggttatgcaccttattatggtgttactcctgtacctccactgcca
agcactgatgcctctcaggggtttgcgattccaccttgggcccagaacccgcagcctccg
agcagtgaccaatctcaggggattgccaatgcaccgtggtcatcaaacccacctcaggca
ccaccgattcagcatgtatcatctacggaacagcagacaactaatggtggtgatactgat
tatgaaaagtttatgtctgagatgaagtga
DBGET
integrated database retrieval system
