Asparagus officinalis (garden asparagus): 109830631
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Entry
109830631 CDS
T05243
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109830631
Enzymes [BR:
aof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
109830631
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109830631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
109830631
NCBI-ProteinID:
XP_020253536
LinkDB
All DBs
Position
2:32166584..32204542
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AA seq
367 aa
AA seq
DB search
MEIVWESPANPPQAQDYIYRKGRRYVRPYYFEFISHAKNRWAGKTIVDLFAEEFKGRPYD
YYVDAVKSGRIQVDGQTVHPSYVVQSSQKISHFLHRHEPPVLAEKITVLESEADVITVCK
PASIPVHPCGQYRKNTIVGILQAEQGLAPLFPVHRLDRLVSGLLIFARNADKAESFRQQI
EGGLLQKEYVAKVVGLFPEGEQVVNANVNFNAREGRSSVEIDEEFSRQPLKGKVACTKFM
RISTNGKHSIVLCKPVTGRTHQIRVHLQYTGHPIGNDILYLSKDVVRRSTFGSGADRAAS
IYMDMPPQTPGSAANSDEFSIDPMCTNCPGLAPVGYDGDEEGLWLHCVRYTGPDWSYECP
YPEWAFP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtgtgggagtcccctgcaaaccctcctcaggctcaagactacatttatcgc
aaagggaggcgatacgttcgaccctactactttgagttcatctcgcatgctaagaataga
tgggcagggaaaaccatcgtcgatctctttgctgaagaatttaagggccgcccttatgat
tactatgttgatgcggtcaaatcagggaggatccaagtggatggacaaactgtccatccg
tcatatgttgttcaatcatcacaaaagataagccactttctgcacaggcatgaaccacct
gttttggctgaaaagattacagtcctagagagtgaagctgatgttattacagtatgcaag
ccagcttctattccagtgcatccatgtggacaataccgtaaaaatactattgttggcatc
ctgcaagcagaacagggcctggcacctctatttcctgttcatcgtctcgatcgccttgtt
tctggtcttcttatctttgctagaaatgctgataaagctgaatccttcaggcagcagata
gaaggtggcctattgcagaaagaatatgttgctaaggttgttgggttatttcctgaggga
gagcaagttgtcaatgcaaatgtaaatttcaatgcaagagaaggaaggagctcagtagag
attgatgaggaattttcaagacagcccttaaagggtaaggtggcatgcaccaagtttatg
aggattagcacaaatggaaaacatagtatcgtcttatgtaaacctgtaactgggcgaact
catcagatacgtgtccatctacaatatacaggtcatccaataggcaatgacatcctctat
ctctccaaggatgttgtacgtcgttctacatttggatctggtgcggatagagctgcctcg
atatacatggatatgccacctcaaacacctggttcagctgccaatagtgatgaattcagc
attgatcctatgtgcaccaactgtcctggtttggctcctgtaggttatgatggagatgaa
gaaggcttgtggctgcattgtgtccggtacactggaccagattggagctatgagtgccca
tatcctgagtgggctttcccttga
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integrated database retrieval system
