Asparagus officinalis (garden asparagus): 109830698
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Entry
109830698 CDS
T05243
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109830698
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109830698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Filament
CTK3
WASH_WAHD
PspA_IM30
CHASE3
ALIX_LYPXL_bnd
TEX13
NDC80_loop
TMF_DNA_bd
DUF641
Motif
Other DBs
NCBI-GeneID:
109830698
NCBI-ProteinID:
XP_020253645
LinkDB
All DBs
Position
2:complement(40634323..40662039)
Genome browser
AA seq
530 aa
AA seq
DB search
MTSGFDSQTLAEKLNKLNSSQQSIESLSSWCISHRRKAKQVVETWEKLFNGSPKEQKVSF
LYLANDILQNSRRKGSEFVTEFWKVLPGALKILYDNSEDHGKNVVMRLVGIWEERKVFGS
RGQGLKSDILGKEPEPPLISDNNGKSSNPIKIVKKDAQTIRLKLAVGGMPEKIVTAYQSV
IDQHVKEDATLNKCKAAIDLVEKIAKDVDVSYTQGNLQGSLLNSELQEQETNLKQCIDQL
KSVEATRASLIAHLKEGIEEQESKLDHIRSQMQAALSETEHVINLRQMIGSAAFSPIPNS
NQNLTIPTSMSVDITPITEPNPALQSSNGPPLQPPPQPVTAFTTSSTSTTDEQQKXXXXS
LLSSLAAEEAASKNGSLSSVSTAGSPPMFPVDKRPKLDKPMPISDLGNSYFGQQQMGSVP
LSMPPLPPFPPPLQPLPPTPSQQFVHTSGATVGVMPYGFPGNPPLPPRPPLPSSMGLVRP
GSLPPPPPPLPPLPPPQQQQQQQNSAPGFFQCQGNGFYGQPQSGPLGPRQ
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtggttttgacagccagacattagcagaaaagctaaataagcttaacagttca
cagcaaagcattgaatcattgtcctcttggtgcatttctcatcggagaaaagctaaacag
gttgttgagacatgggaaaagctattcaatggctctccaaaagaacagaaagtgtctttt
ctttatttggcaaatgacatattacagaatagcaggcgcaaagggagtgaatttgttact
gagttctggaaggttcttccaggagcgctgaaaattttatatgataacagtgaagatcat
gggaagaatgtggttatgagattagtaggaatttgggaagaaaggaaggtctttgggtcc
cgtgggcaaggccttaaaagtgatattcttggtaaagagcctgaaccgcctctaatttcg
gataacaatgggaagagttcaaatcccataaaaatcgtcaagaaagatgctcagacaatt
agactgaaactggcagttggtgggatgccagaaaaaatagtaactgcatatcaatctgtt
attgatcaacatgtcaaggaagatgccaccttgaacaaatgtaaggctgctattgatctg
gtagagaagatagcaaaagatgttgatgtttcttacacccaaggtaatctgcaaggatca
cttttgaacagtgagcttcaggagcaggagactaatctaaaacagtgcattgatcaactc
aaaagtgttgaagccactagagcatctctgatcgctcatctaaaggaaggaatagaagaa
caggaatcaaagctggaccatatccgcagtcagatgcaagctgctttaagtgagacggag
catgtcatcaacttgaggcagatgatcgggtcagcagctttcagcccaatccccaacagt
aaccagaacctgaccatcccaacgtccatgtcagtagatataacacctataacagaacct
aatccagctcttcaatcatcaaacggtcccccacttcaaccaccaccgcaacctgttact
gccttcacaacctcctcaaccagcaccacagatgagcagcagaagannnnnnnnnnctct
ctcctatcctctctcgctgctgaagaagctgcgtcaaaaaatggcagtctgagctctgtc
agcaccgcgggtagcccaccaatgtttcctgtcgacaaaaggcccaaacttgataaacca
atgccaatctctgatctcgggaactcatattttggccagcagcaaatgggatctgttcct
ttatcgatgcctcctctgccaccctttccaccgcctctgcagccattgccaccgacaccc
agtcagcaatttgtgcatacgagtggagcaactgtaggagtgatgccttatggatttcca
ggcaatcctcctcttccaccgcggcctcctctgccttcttcaatgggtttggtaagaccc
ggtagtttgccacctccacctccacctttgcctccgcttcctccacctcagcagcaacaa
cagcagcagaattcagctccggggtttttccagtgtcaagggaacgggttctacgggcag
ccacagtcaggtccactgggaccaaggcaatga
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