Asparagus officinalis (garden asparagus): 109830711
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Entry
109830711 CDS
T05243
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109830711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109830711
03009 Ribosome biogenesis [BR:
aof03009
]
109830711
04131 Membrane trafficking [BR:
aof04131
]
109830711
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109830711
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109830711
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109830711
Membrane trafficking [BR:
aof04131
]
SNARE
SNARE associated proteins
Others
109830711
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109830711
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109830711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_28
nSTAND3
Mg_chelatase
AAA_17
AAA_18
ATPase_2
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
AAA_7
NB-ARC
DUF815
TsaE
Viral_helicase1
AAA_24
NACHT
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
109830711
NCBI-ProteinID:
XP_020253665
LinkDB
All DBs
Position
1:complement(12814182..12819744)
Genome browser
AA seq
761 aa
AA seq
DB search
MEKLQLFRGDTILLKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVVSVHQC
QDVKYGKRVHILPIDDTIEGLTGNLFDSYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKI
IETDPPEYCVVSPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNL
RKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGA
TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIAKDTHGY
VGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFKTALGTSNPSALRE
TVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAMQR
GGSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRHQIFKACLRKSPVAKDVDLVALAKYTQGFSGADITEICQRACKYAIRENIEKD
IERERRRSENPEAMEEDDNDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSR
GFGTEFRFAERSETAAELQLTMMTCIVRLRLWCSFVDSGFG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctgcagctttttcgcggtgacacgatccttttgaaggggaagaaacgtaaa
gacactgtttgcattgcccttgctgatgagacgtgtgaagaaccaaagataagaatgaac
aaggttgttcgttcaaatctcagagtgaggcttggtgatgtggtttcagtccatcaatgc
caggatgttaaatatgggaagcgtgtgcacatactaccaattgatgatactattgaaggc
ttgacggggaacttgttcgactcatatctgaaaccatacttcctggaagcatatcgacct
gttagaaaaggagaccttttccttgtaagaggaggcatgagatctgttgagtttaagatt
atagaaaccgatcccccagagtactgtgttgtctctcctgacacagagatcttttgtgaa
ggagaacctgtgaaaagggaggatgaggatagacttgatgaggtaggttatgatgatgtt
ggtggtgtacgaaaacaaatggctcaaatcagagagttagttgagcttcctttaagacac
cctcaacttttcaagtcaattggtgtaaaaccaccaaaagggattttgttatatgggcct
cctggctctggaaagactctcattgcaagagcagttgcaaatgagactggcgcctttttc
ttttgcattaatggtccagagatcatgtccaaactagctggagaaagtgagagcaacctt
aggaaggcttttgaagaggcagaaaagaacgcaccgtcaattatatttattgacgagctt
gattcaattgctcccaagcgagaaaaaacgcatggggaagtcgagaggcgtattgtctca
caactgctgacactgatggatggattgaaagctcgtgctcatgtcatagtcatgggagct
acaaacagaccgaatagtattgatccagctcttagaaggttcgggaggtttgatagggaa
attgatattggagttcctgatgaagttggacgactggaggttcttcgtattcatacaaag
aacatgaagctagctgaggaggttgacctggaaagaattgctaaggacacacatgggtat
gtcggagctgatctcgctgcactatgcactgaagctgcccttcagtgcatacgagaaaag
atggatgtcattgacttggaagatgagaccatagatgcagagatacttaactctatggct
gtcactaacgaacatttcaagactgctcttggaacaagtaatccgtctgcacttcgtgaa
acagttgttgaagtgcctaatgtcagctgggatgatattggtggtctagagaatgtgaag
agggaactgcaagagactgttcaatatccagtcgaacatcctgagaagtttgagaagttt
ggcatgtcaccttcaaagggtgtgttgttttatgggcctcctggatgtggcaagactttg
ttggccaaggcaatcgccaacgaatgccaagcaaactttatcagcgtgaaggggccggaa
ctgctcaccatgtggttcggtgaaagtgaagcaaatgtacgcgaaattttcgacaaggct
cgccagtctgcaccctgtgtcctcttctttgatgagctggactccattgcaatgcagagg
ggcggtagcgttggagatgcgggtggtgcagctgatagagttctcaatcaactccttacc
gagatggatggaatgtctgctaaaaaaaccgtttttattatcggggcaacaaacaggcct
gatattatagatccagcgttgctcaggcctggtcgtcttgaccagctaatttatatacct
ttgccagatgaagcctctcgtcaccagatattcaaagcttgcctgcggaaatcaccagtt
gccaaagatgttgatctggtggctcttgccaagtatactcaaggctttagtggtgcagat
attactgagatttgccaacgtgcttgcaagtatgcaatcagagaaaacatcgagaaggac
attgaaagggaaaggaggagaagcgagaacccagaggcaatggaagaagacgacaacgac
gaagttgcagagatcaaagcagctcacttcgaagaatccatgaagtttgcgcgaaggagc
gtgagtgatgccgacatcagaaagtatcaggcgtttgcgcaaaccttgcagcaatcaaga
gggtttggtactgagtttcgtttcgcagaacggtctgaaactgctgcagagctgcagctg
acgatgatgacttgtatagttaggttgaggttatggtgctcatttgttgacagtggcttt
ggatag
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