Asparagus officinalis (garden asparagus): 109831490
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Entry
109831490 CDS
T05243
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109831490
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109831490
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
109831490
NCBI-ProteinID:
XP_020254416
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Position
1:6928314..6931047
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AA seq
442 aa
AA seq
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MKRERSFVLLITLALLLSIFSNGHQNGAQKHSKHIKEKDHNSNSTHYDIRTFGAVGDGVS
DDSEALIEAWKAACKVYGATVEIPSGLNFLLRPVTLQGPCMPHLILQIDGTLLAPPSVAS
WSKSSLFQWINLKWVSDFTIQGNGTLDGQGSSWWSLSATPQSTNKETTSSPLEMRPTVLR
FYASCNIMVRNIHIINSPLCHLKFDSSRGVKVSNIMISSPKDSPNTDGIHLQNTRDVEIK
HSNIGCGDDCVSIQTGCANVNIHHLDCSPSHGISLGSLGKGSSLACVSNVSVNTITVQNA
LSGVRIKTWQGGKGSVKNATFSNIRVSDVEIPIVIDQYYCNKRSCKNKTEAVAISDVTYK
GITGTYTYKPLSIACSDSLPCTDLSLIDVQLSPYYESRSHQEAFCWKSYGEAQGSLEPSG
VSCLRKNSKVIRALTKSYKYTC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggagagaagcttcgtcttgcttattactttagctcttttgctgtccattttt
agcaatgggcatcaaaatggagctcaaaaacattcgaagcatataaaggaaaaagatcat
aacagcaattctacccattatgatatccggacatttggagctgtgggtgatggagtttcg
gatgattcagaggcacttatagaagcatggaaagcagcatgtaaggtatatggagcaact
gtggaaattccatcaggattaaattttctactaagaccagttactcttcagggtccttgt
atgcctcaccttattcttcagattgatggaactctcttggcacctccaagtgtagcttcc
tggtccaagtccagtctcttccaatggattaacttgaagtgggtcagtgacttcacaatt
caagggaacggtactctcgatgggcagggctcttcatggtggagtctctctgcaactcct
caaagcaccaataaagaaacaacaagctcaccattagagatgagaccaacagtactcaga
ttttatgcaagctgcaatattatggttcgcaatatccatatcatcaatagtcctctgtgt
cacctaaaatttgatagttcaaggggggttaaagtaagtaacatcatgatctcttcccca
aaagacagcccaaacaccgacggtatacatctccaaaacactcgtgatgtggagatcaag
cattccaacattggttgtggtgatgattgtgtatctatacaaactggctgtgccaatgtc
aacatacatcatcttgattgcagccctagccatggaatcagcttaggaagtcttgggaaa
ggcagcagcctggcttgtgtctccaatgtttctgtcaataccatcacagtgcaaaatgca
ctatctggtgttcgtatcaaaacatggcagggaggtaaagggtcagtcaagaacgcaact
ttctccaatattcgagtctcagatgttgaaattcctattgtaatcgatcaatactactgc
aacaaaaggtcgtgcaagaacaaaacagaagcagtggcaatatctgatgtcacttataaa
ggaattacaggaacatatacgtataaacccttgtctatagcctgcagtgatagcttgcca
tgcactgatttaagtctaattgatgtccagttgtcgccatattatgagtcgaggagtcac
caggaggctttctgttggaaatcctatggagaggcgcagggctctcttgagccctcaggt
gtcagttgtttgaggaagaacagtaaggtaattagggccctaacaaagtcgtataagtat
acttgctaa
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