Asparagus officinalis (garden asparagus): 109831609
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Entry
109831609 CDS
T05243
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109831609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aof02000
]
109831609
Transporters [BR:
aof02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109831609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
ABC2_membrane
AAA_22
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
109831609
NCBI-ProteinID:
XP_020254555
LinkDB
All DBs
Position
2:74061068..74135033
Genome browser
AA seq
1882 aa
AA seq
DB search
MASSRRQLRAMLRKNWLLKIRHPFTTLAEILLPTVVMLMLIAVRTQVDTRIHPVEAYIRK
GMFVEVEKSDISPSFDSILKLMYQEKEHLAFVPDTNATRFMLDILSLKFPLLKEVGRIYK
NELALETYIRSEFYGIHDAGRNLSNPKLRGAVVFHKQGPQVFDYSIRLNHSWAFSGFPDV
KTIMDVNGPYLNDLELGFNIVPTLQYGYSGFLTLQKVVDSFVILASHQEVNIINPESKGL
PLSHSIETQAYVNHQWTQFIPANIRIAPFPTREYTDDEFQSIVKNVMGVLYLLGFLYTIS
RLISYSVFEKEHKIKEGLRMMGLKDETFYLSWFITYCLQFAISSAIITACTMSSLFLYSD
KSLVFTYFFVFGLSAVMLSFLISTFFSRAKTAIAVGTLSFLGAFFPYYSVNDPAVPMIWK
ILASLLSPTAFALGTINFADYERAHVGVRWTNLWQSSSGVNFLACLLMMMLDTFLYCGLG
LYFDKVLPRDSGLRYPWNFLFTKTFWGRKDVSCSHDTKQEQKFYREEVEPSGKGAFEPVS
FDMKQQVVDRRCIQIRNLHKVFMTKKGSCCAVNFLNLTMYENQILALLGHNGAGKSTTIS
MLVGLLPPTSGDALVFDKNIITDMDEIRQTLGVCPQSDVLFPELTVKEHMEIFAVLKGVE
DHCFDRTVTEMVEEVGLADKMNTVVDALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDP
YSMRSTWQLIRKIKKGRIILLTTHSMDEADVLGDRIAIMGNGHLRCCGSSLFLKHRYGVG
YTLTLTKTSPTTSVAADIVHRHVPTATRLSDVGTEISFRLPISSSSSFENMFREIESCIR
RPEVAGEYSTTYDGVHGIESYGISVTTLEEVFLKVAGQSIDEIDYNHQITNAGSDSLTSE
ISQTTLIEPSVSILCSGVYGKFLRQISSAVGRIFGLTFATICSFIAFFIIKLCCCGMITS
STFWKHSKALLIKRAVSARRDRRTIVFQLLIPAVFLLFGLLFLKLKPHPDQHSVTLTTSN
FNPLLTGGGGGPIPFNLSLHIAEEVASCVKGGWIQKEEPRTFRFPNPEKALADAIDAAGP
TLGPTLLSMSEYLITSLNESYQSRYGAVVMDDQNDDGSLGFTVLHNSSCQHAAPTYINVV
NAAILRHATGDTNMTIQVRNHPLPVTMSQKSQRHDLDAFSAAVIVSIAFSFIPASFAVAI
VKEREVKAKHQQLISGVSVLSYWISTFLWDFISFLFPTVLAVFLFFIFDLNQFIGNGCFI
PTIIIFLDFGLAIAASTYCLTFFFSDHTVAQNVVLLVHFFGGVILMVISFLMGVIEATKS
LNSMLKNFFRLSPAFCFADGLASLALRRQGMKLGSSGEIFDWDVTGASITYLFVESIAYF
LLTIGLEYVPHYKLKFSGIGTWWDRLISFQPDISQSYFQPLLGSSDGVSNSVADEDVDVV
AERHRVISGYADNAILYLYNLRKVYPAQGSHAAKVAVRSLTFAVQEGECFGFLGTNGAGK
TTTLSMLTGEQCPTDGTAYIFGNDLRLHPKAVRQHIGYCPQFDALLEFLTVREHLQLYAR
IKGVPEINLNNVVDEKLTEFDLWRHADKPSYSLSGGNKRKLSVSVAMIGNPPIVILDEPS
TGMDPIAKRFMWDVISRLSTRRGKTAVILTTHSMDEAQALCTRIGIMVGGQLRCIGSPQH
LKTRFGNHLELEVKPTEISPIQIDTLCRRIQETLFDFPSSTRSILGDLEICIGGIDSLSS
NCLSEISLTREMIILAARMLGNEESVLTLVSSNPVTDGAFGEQLSEQLIRHGSIALRIFS
EWWLAKEKFLHIDSFIHSSFPGAIFHGCNGLSVKYQLPYGEGSSLADIFGHVEHNRAELG
IEEYSISQSTLETIFNHFAGMP
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttctcggcgtcagctgagggccatgctccgcaagaactggctcctcaagatc
cgccaccctttcaccactcttgccgagattctgctgccgacggttgtgatgctgatgctg
atcgcggttaggacgcaagtggacacgcggattcaccccgttgaggcgtatattcggaag
gggatgtttgtggaagtggagaagagcgatatttcgccgagttttgatagtattctgaag
ctgatgtatcaggaaaaggagcatttggcgttcgtgccggacacaaacgcgacgaggttc
atgttggatatcttgtctctcaagttcccgcttctcaaggaggttggaagaatttacaaa
aacgagttagctcttgaaacttacatccgttcagaattttatggcattcatgatgctggc
aggaacttatctaacccgaaattaagaggagctgtagtttttcacaagcaaggtcctcaa
gtgtttgattatagtatacgtcttaatcactcatgggcattttctggttttcctgatgtt
aaaaccatcatggatgtgaatggaccatatctgaatgacctcgaactgggatttaatatt
gtgccaactctacaatatggatatagtggctttttgactttgcaaaaggtggtggattca
tttgtaatacttgcttctcatcaagaagtaaatattatcaatcctgagagtaaaggattg
cccttgtcacattcaatagaaactcaggcttatgtcaaccatcagtggacacagttcatt
ccagcaaacattaggattgctccgtttcctactcgtgaatacacggatgatgaatttcag
tctattgttaagaatgtcatgggagtactttatctgctggggtttctttatacgatttcc
cgtctaattagctattctgtctttgagaaggaacataaaattaaagaagggttacggatg
atgggcctaaaagatgaaacattttacctttcttggtttataacttattgcttacagttt
gcaatttcttctgcaatcattacagcatgcacaatgagcagtcttttcttatacagtgat
aaatcactggtcttcacctacttttttgtatttggtctaagtgccgtgatgctttctttt
ctgatatctacatttttctcgagagcaaaaactgctattgcagttggtaccctctctttt
ttaggggccttctttccttattactcggttaacgatcctgcggtccctatgatatggaag
attttagcttctttgctatcacccactgcttttgctcttggcacaatcaattttgctgac
tatgagcgtgctcatgttggtgttcgttggaccaatctttggcagtcctcctctggagtt
aattttttggcctgcctactgatgatgatgcttgatacatttttgtattgtggtctgggg
ctatactttgataaggttcttcctagagatagtggcttgcgctatccttggaacttctta
tttactaagactttctggggaaggaaggatgtctcctgcagtcatgacacaaagcaagag
cagaaattttacagggaggaagtagaacccagtgggaagggtgcatttgaaccagtaagt
ttcgatatgaaacagcaggtggttgacagaagatgtatccagatcagaaatctccataag
gtctttatgacaaagaagggtagctgctgtgcagtcaactttcttaatctcaccatgtat
gaaaatcagattcttgcacttctagggcacaatggagctggtaaaagcactaccatttca
atgcttgttggtcttcttcctcctacttctggcgatgcattggtgtttgacaagaatatt
ataacagatatggacgagatacgacagacgttgggtgtttgtcctcaaagtgatgtactt
tttccagagctaacggtcaaggagcacatggagatatttgctgttttgaaaggtgtagag
gatcactgctttgacaggacagtaactgaaatggtagaagaagtgggtctagcagacaaa
atgaatacagttgttgatgcactttcaggagggatgaagaggaaattgtcccttggtata
gccctcattggaaacagcaaggttatcattcttgatgagccaactagcggcatggatcca
tactcaatgcggtcaacttggcaattgataaggaagattaagaaagggaggataatatta
ttgacaacacactccatggatgaagctgatgttctaggagatcgaatcgccatcatgggt
aatggacatttacgatgctgtggaagttcccttttcttgaagcatcgctatggggttggt
tatacacttacacttacaaagacttctcctactacatctgtagctgcggatattgttcat
cgtcatgttcctacagctacccgcttatctgatgttggtacagaaatttcgtttagactt
cctatttcatcatcttcttcatttgagaatatgttccgggagatagaaagctgcataaga
agaccagaagtggctggtgaatatagcacaacttacgatggagttcatggtattgaaagt
tatggaatctctgtcaccactcttgaggaggtgtttttgaaagttgcaggacaaagcata
gacgagatagattataatcatcagataaccaatgctggatctgatagcctgacctctgag
atctctcaaactactcttatagaaccatcagtttccatattgtgctctggtgtttatgga
aagtttcttaggcagatttcttcagctgtgggaagaattttcggtttaacatttgctaca
atctgcagtttcattgccttctttataattaagttatgttgctgtggaatgattacaagc
tcaacattttggaagcattcaaaagctcttcttataaaaagggctgtatctgctcggaga
gatagaagaaccattgttttccagctgttaattccagcagtcttcttgcttttcggttta
ctttttctgaaactgaagccacatcctgatcagcattctgtgactcttactacatcaaat
ttcaaccccttgctaacaggaggtggtgggggaccaattccattcaatttatcactgcac
attgctgaagaggttgcatcttgtgtgaaggggggctggattcaaaaggaggaaccaaga
actttcagatttcctaatcctgaaaaggcacttgctgatgctattgatgcagctggccca
actctgggtccaactctgctttccatgagtgaatatctaattaccagccttaatgaatct
tatcagtccaggtatggcgcagttgtcatggatgatcaaaacgatgatggaagtttaggt
tttaccgtacttcacaatagttcctgtcagcatgctgcaccaacctatatcaatgtcgtg
aatgctgcaatattgaggcatgcaactggtgatacaaatatgacgattcaagttcgcaat
caccctttgcccgtgacaatgtctcagaagtcacaacgtcacgatctagatgcattctct
gctgcagtgattgttagcatcgcattttcctttattccagcttcatttgctgttgctatt
gttaaggaacgtgaagtcaaagcaaagcatcaacagctgatcagtggggtttctgtatta
tcatattggatttcaacatttttatgggacttcatcagcttcttatttcctacagtcctc
gcagtgtttctatttttcatcttcgatctgaatcagtttattggaaatggttgctttatt
ccaactatcatcatatttttggatttcggattagcaattgctgcatcaacatattgcctt
acctttttcttttctgatcatactgttgctcagaatgtggttttgctggtgcactttttc
ggtggagtcatccttatggttatttcatttctgatgggagttattgaggcaacaaaaagt
ttaaattctatgcttaagaacttttttaggttatctcctgcattttgctttgcggatgga
cttgcatctcttgcccttcggcgccaggggatgaagttgggatccagcggggaaattttt
gattgggacgtgactggtgcctctattacatatttatttgttgagagtatagcatatttt
cttcttacaattgggcttgagtatgttccgcattacaagctaaagttctctggaatcgga
acatggtgggatcgtcttatttcttttcagcccgacatatctcagagttattttcagcct
ttactgggatcatctgatggtgtatcaaactcggtagctgacgaggatgtagatgttgta
gcagaaaggcatagggtaatcagtggatatgctgataatgccatactatacttgtataat
ctgcggaaggtttatcctgcacaagggagtcatgctgcaaaggttgcagttcgctccttg
acttttgctgttcaggaaggagagtgctttggttttctaggaacaaatggggctggaaag
acgacaacattgtcaatgctgaccggggaacagtgcccgacagatggaactgcatatatt
tttggtaatgacttgcggttgcatcccaaggctgtccgtcaacatattggttactgtcca
cagtttgatgctcttctagaatttttgactgttcgtgaacatcttcaactatatgcacga
ataaagggtgtacctgagattaatttaaataatgttgttgatgagaagttgacagagttc
gatttatggaggcatgcagataagccatcatattcacttagtgggggtaacaaacgcaag
ttatccgtttctgtcgcaatgattggcaatcctcccatagtgattcttgatgagccttct
acaggtatggatcctatcgccaaaaggtttatgtgggacgtcatatctcggttatctact
aggcgaggaaagacagctgttatactaacaacacacagcatggatgaagctcaggctctc
tgcacaaggattggaattatggtgggtggccaactcagatgcattgggagcccgcagcat
cttaaaacacgttttgggaatcatcttgagcttgaggtaaaacccacagagatcagtccc
attcagatagatactctttgtagaagaatacaagaaaccctttttgactttccaagtagt
acgcgaagcatactcggtgaccttgaaatttgcattggtgggattgactcattatcatca
aattgtctatcagaaatcagtttaacacgggaaatgataattttagctgcgcgtatgctg
ggaaatgaagaatccgttttgacacttgtatcgtctaatcctgttactgatggtgctttt
ggtgaacaattgtcagagcaacttattcgacatggtagtatagctctgagaatattttct
gaatggtggctggccaaggagaagttcttgcatattgattcattcattcattcttcattt
cctggtgcaatatttcacggttgtaatggattaagtgttaaatatcagttaccgtatggg
gaaggttcctctcttgcggacatatttggacatgtggagcataatcgggctgaactaggg
attgaagaatacagcatcagtcagtccacactagagactatctttaaccattttgctgga
atgccatga
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