Asparagus officinalis (garden asparagus): 109831662
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Entry
109831662 CDS
T05243
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109831662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109831662
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
RNases
109831662
SSDB
Ortholog
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HIP1_clath_bdg
AAA_23
Macoilin
Motif
Other DBs
NCBI-GeneID:
109831662
NCBI-ProteinID:
XP_020254621
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All DBs
Position
2
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AA seq
512 aa
AA seq
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MEEAIAKADKEVLAEIVKFSQKNSLKGSKGGWKEFLDSHDQKFGSGLSDPSKRSADVLIA
FLLTFTKKDCKFLSKMIKRRSDRAEMERFVKEFPDQETPEQRLVQLTVEHPQYTQHYSFP
SHDEDWMIVPLGKIFKVMSSQTLLSVDCEMVLCRDGTDAVVRVCAVGRNLEVKLDKLVKP
SKDVVDYRTYITGISAKDLEGVTCSLDEIQKSLKKLLSHGTILVGHALHNDLKALKIDYP
RVIDTASIFKLKNLPTTYSPSLNNLCKSVLGYEVRKEGEPHNCLTDAQAAMKLVLAKLEN
GFDDPIAIDGKNVPESDLMKLFLHKVPVEVPCQELRGVFSVKYDIDIQDDLRVRGQHYST
FAIFKDAGDAYSAFRGIEGQETMDTSGRLQKNVTLTQSTGRTFTFYVRRMTADGLLNNIK
FPKKRNALEDDTQDQKRQRTSLLQCYHIEEIEKLKQELRDRDDLVKEIEKLKQELRDRED
RVEEIEKLKQDLHDREDEIFKLQEIIASREET
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaatcgccaaagcagataaagaggttcttgctgagatcgtgaaattctct
caaaagaacagcctgaaaggatctaaaggagggtggaaagagtttttggattctcacgac
cagaaatttggctctgggttaagcgatccatcgaaaaggtctgctgatgtgttgattgcg
tttctgctaacgttcaccaaaaaagattgcaagttccttagtaaaatgataaagcggcgg
agtgatcgtgcggagatggagaggtttgttaaagagtttcctgatcaggaaaccccggaa
cagaggttggtccagttgactgttgagcacccccaatacactcaacattactccttccca
tcccatgatgaggactggatgattgtgcccctaggtaaaatttttaaggtaatgagttca
caaacattactttctgttgattgcgagatggttctttgccgagatggtactgatgcggta
gtcagagtatgtgctgtgggtcggaacttggaggttaaacttgataaacttgtaaaaccc
agtaaagatgttgttgactatagaacatatattactggtatctctgctaaagatttggag
ggcgttacatgttcattagatgaaatacagaaaagtttgaagaagttgttatcacatggt
acaattttagttggccacgcgttacataatgatctgaaagcattaaagattgattatcca
cgagtcattgatacagcatccatcttcaagttgaagaacttgcctactacttattcacct
tcattaaacaatttgtgtaagtctgtgctgggttatgaagttcgtaaggaaggtgaacca
cataattgccttactgatgcacaagctgcaatgaagttagtgcttgccaagctggagaat
ggatttgatgatccgattgccattgatggaaaaaatgtgccagagtctgatctaatgaag
ctgtttcttcacaaagtacctgttgaagtaccttgtcaagaattgcggggtgtattttct
gtgaaatatgatattgatattcaggatgatttaagagttcgaggccaacactattctact
tttgccatttttaaggatgcgggagatgcctactccgcatttagaggaatagaagggcaa
gaaaccatggacactagcggacgtctacagaagaatgtcacgctcacacagagcacggga
cgaacatttactttctatgtccgcaggatgacagcagacggtcttcttaataacatcaag
ttcccaaagaaaagaaacgccctagaagatgacacccaagaccagaaaaggcagagaacg
tccctgctacagtgttatcacatagaagaaatcgagaagctgaagcaggagctccgagat
agagatgatcttgtgaaagaaatcgagaaattaaagcaagagctccgagatagagaagat
cgtgtcgaagaaatcgagaaattaaagcaagaccttcatgatagagaagatgagatattt
aaattgcaggagattattgcttctcgtgaggaaacatga
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