Asparagus officinalis (garden asparagus): 109831705
Help
Entry
109831705 CDS
T05243
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109831705
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
109831705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
Rhomboid
UBA_7
DER1
DUF6245
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
109831705
NCBI-ProteinID:
XP_020254678
LinkDB
All DBs
Position
2:complement(77779383..77784832)
Genome browser
AA seq
293 aa
AA seq
DB search
MNGGPSGFHNAPVTRTFVIASAILTILLGIQGRSKKLGLSYQDIFHTFRLWRFIGSLFAF
SSTPELMFGLYLLYYFRVFERQIGSNKHSVFMFFSVILSSLFEILALTYLRDPSNVLVSG
PYGLIFASFVPFYFDIPVSSRFRICGVQFSDKSFVYLAGLQLLFSSWTRSFIPGICGVLA
GSLYRLNLLYIRKIKFPDVVASSFSRLPWPLPATSSHISSGSNSENVPLNASHQMEGNYQ
SAARASAPELASETSVATLVSMGFDRNSARQALIHAGDDINLATNILLEAQSH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggaccttctggatttcataatgctccagtcaccagaaccttcgtgatcgcc
agcgctatattaacgatcctgttggggattcagggtcgctctaagaaactgggactctca
tatcaggatatttttcacacgtttcggctgtggagattcattggttcattgtttgccttt
tcatcgacaccggagctaatgtttggactatatttgctctattactttagggtgtttgag
agacagataggctctaataaacattcggtgtttatgtttttctctgtgatcctatcatcg
ctatttgagatcctagctctgacatatctaagagatccctcaaatgtgttggtatctggc
ccttacggtctgatttttgcttcttttgtacctttctattttgacattccagtttcatca
agattccgtatatgtggtgtacaattcagtgacaagtcatttgtatatttggcgggtctt
cagcttctcttctcatcgtggacgcggtcattcataccgggcatttgtggagtacttgct
gggtctttatatcgcctaaatctactgtacatccgaaaaataaagttcccggatgttgtc
gcatcatctttctcaaggttaccttggcctctgccagcaacttcatctcatatatcaagt
gggagtaactcagaaaatgtgcctcttaatgcaagtcatcagatggaagggaactatcaa
tctgctgcccgtgcttcggcgccagaactggcctctgaaacttctgtggcaacattggta
tccatgggcttcgacagaaattcagcacgacaagcactcatccatgctggagacgacatc
aatttggcaacgaacatcctcctcgaagcgcagtcgcattag
DBGET
integrated database retrieval system
