Asparagus officinalis (garden asparagus): 109831744
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Entry
109831744 CDS
T05243
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109831744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109831744
03036 Chromosome and associated proteins [BR:
aof03036
]
109831744
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109831744
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109831744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF1570
C19orf84
Motif
Other DBs
NCBI-GeneID:
109831744
NCBI-ProteinID:
XP_020254732
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All DBs
Position
2:complement(79442334..79481771)
Genome browser
AA seq
1093 aa
AA seq
DB search
MEMDTDANLSFFDPEYSAYREPYRRYRKRQSTSSISPLLGNSVSRFSEARLLIDGNNIQR
RPNAALLLEEIKQEVENYDADGLEGSAQKAFYSSKRRVSTDSHTVSELNAGFDSIRQVTS
QSLKSCKHEDEVLVDGGENTFTLFASLLDSALQGLMSFPDLLLQFKNTCRNVSEAIRQSS
TGRHRVVEDKFMQQKARLLRDEAASWSLLWYLFGKGNEELPEQLMLSPTTSHQEACQFVI
KDHTAQLCLRVILWLEELASESLDLEKKLRGSHVGSYLPSFGVWHHTQRFLKRKNDDPDI
VKHMDFDAPTREVARQLPDDKKQDELLMEDVWILLRAGRLEEACELCRSAGQPWRAATLC
PFGGLDQFPSVEAMHKNGKTRILQAIELESGIGHQWRLWKWASYSASEKIAEQNGGRYEM
AVFAAQCSNLKRVLPICTDWESACWAMAKSWLDAQVDVELTDFPQGRLEDKHYGDGMNGT
PSQGIQTSLPSAGPETWPCHVLDQQPRDLPSLLQKLHSRDIVNEAVSRACKEQHRQIEMN
LMIGDIARLLDLIWSWISPSEDDQNVLRPHGDPQLMRFGAHVVLILRYLLGDEMKDAFKE
KLTTVGDLILQMYAMFLFSKQHEELVGVYASQLARPFCIDLFVHMMELRLNSSMHVKYKL
FLAAVEYLPFSSEDKSKACFEEIIERILSRSREIRCSKNDGLSDVAEQHRLQSLQKAMVV
QWLCFTPPTTINDFEIIKAKLFTRALIHSNTLFREFALISMWRVPKMPVGAHMLLSFLAE
PLKQPNDTFPSVDDNDVSENLHEFEDWREYYSCDATYRNWLKIELENSAIPPADLSSEEK
ENAMAAARETLQSSLSLLLREGSPWLNAAHSSLRESTENIFLELHATAILCLPSGESMCP
DATLCTTLTSALYSSVSEEIVLKRQLMVNVSISPKDKYTLEVALRCLAVNGDGLGVHEAN
DGGLLATVMAAGFKVGELKRFQMGVTMEISRLDAWYSDNEGSLENPAAYIVKGLCRRCCL
PEMILRCMQVSASLAESGESPDHRNELIELVASAESGMMQLFSQHQLQEFLLFERECTLY
AMEAQEESSMVDA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggagatggatacagacgctaatttgagcttcttcgatcctgagtattccgcttacaga
gagccctatcgccgttacaggaaaagacagtctacgtcaagtatttctcctcttcttgga
aattcagtatcaagattttcagaagctagactcttgatcgatggtaataatattcaaaga
cggcctaatgctgcacttctccttgaagaaatcaagcaggaggttgaaaattatgatgct
gatggccttgaaggatcagcacagaaagcgttttattcctcaaagagaagggtgtctact
gatagtcatacagtctcagagcttaatgctggctttgattcaattcggcaagttacgagt
caatcattgaaatcttgcaagcatgaagacgaggtgttagtcgatggtggagagaataca
tttacgttatttgcatctcttcttgattctgcacttcaaggattgatgtcattccctgat
ctattattgcagtttaaaaatacgtgtcgaaatgtctcggaggcaattaggcagagcagt
actggcaggcatcgggtagtagaggacaaatttatgcagcaaaaagctcgattattgcgt
gatgaggcagcttcttggtcgcttctttggtatctctttgggaaaggaaatgaagagcta
cctgaacagctcatgctgtctccaacaacctcacatcaggaagcctgccagtttgttatt
aaagatcatacagcccagttatgtcttcgggttattctttggcttgaagaattagcctca
gaaagtctggatttggaaaagaagctgaggggatctcatgttggttcatatcttccaagc
tttggtgtatggcatcatacacagaggttcttaaagagaaaaaatgatgatcctgacatt
gtcaaacacatggattttgatgctccaacacgggaagtagctcggcaactccctgatgac
aaaaaacaagatgaattacttatggaagatgtctggattcttctaagagctggaagattg
gaggaggcatgtgaactttgccgttctgctgggcagccatggagagcggcaactctatgt
ccttttggggggttggaccaatttccctcagtggaagctatgcacaaaaatgggaagaca
agaattttgcaagctattgaactggaaagtggaattggacaccaatggagactttggaag
tgggcatcatatagtgcctcagagaaaattgcagagcaaaatggtggaagatatgagatg
gctgtatttgctgctcagtgtagtaacttgaagcgtgtgctacctatctgcactgactgg
gagtcagcatgctgggcaatggcaaagtcctggcttgatgctcaagttgatgtagaatta
actgactttccacaaggaagactggaggataaacactatggtgatggcatgaatggaaca
ccttctcaaggaattcagacttcgttgccttcagctggtcctgaaacatggccatgtcat
gttcttgatcagcaacctcgtgaccttccttctctccttcaaaaacttcattctcgtgat
attgtgaatgaagctgtttctcgagcgtgcaaagagcagcatcgacaaattgagatgaac
ctcatgataggagatattgcgcgtcttctagacctcatttggtcatggatatcaccatca
gaagatgatcagaatgttttgaggcctcatggtgacccccaattgatgcgttttggagca
catgttgttcttattcttagatatctacttggtgacgaaatgaaggatgctttcaaggag
aagcttactactgttggtgatctcattcttcagatgtatgcaatgttcttattttccaag
caacatgaggagttagttggggtgtacgcctcacagctggctcgtccgttttgcattgac
ctttttgtccacatgatggaactcaggctcaatagcagtatgcatgtcaaatacaagttg
ttcctggctgcagtggagtacttgcctttctcttctgaagataaatccaaagcatgtttt
gaagaaattatagaaaggattctttcacggtctcgagaaatcagatgtagtaagaatgat
gggctatcggatgttgcagagcaacatcggttgcagtcccttcaaaaggccatggttgta
cagtggctttgcttcacaccacctactactataaatgattttgagattataaaggcaaag
ctcttcacgagggcactaattcatagcaatactttattcagggagtttgccttgatatct
atgtggagagtccctaaaatgccagttggagcacatatgttactcagcttccttgcagaa
cctttaaaacagcctaatgatacttttccatctgttgatgataatgatgtttctgaaaat
ttgcacgaatttgaagactggcgagagtactattcatgtgatgcaacttatcggaactgg
cttaagattgagttggagaactctgctattcctcctgctgatctttcttcagaagagaaa
gaaaatgctatggcagctgcaagggaaacattgcagtcatctttatcacttctacttagg
gaaggaagcccatggttaaatgcggctcatagtagcctacgcgagtcaacagagaatata
tttcttgaattgcatgcaactgcaatactctgtcttccctcaggggaaagcatgtgccca
gatgcaaccttatgcaccacattgacaagtgctctctactcttccgtgagtgaggaaatt
gtgctaaagcgccagctgatggtcaatgtttctatttcgcctaaagataaatacacgctt
gaagtagcactccgctgtttagctgttaatggtgatgggcttggagttcatgaagcaaat
gacgggggacttcttgctaccgtcatggcagctggtttcaaagtaggagaacttaaacga
tttcaaatgggtgtcacaatggagatatcccggcttgatgcttggtactcagataatgag
ggttcattggaaaaccctgctgcttatattgtcaaaggtctctgccgccgatgttgccta
ccagaaatgattcttcgatgtatgcaggtatctgcttctcttgctgagtcaggtgaatca
cctgatcatcgtaatgaattgatcgaacttgtagcttcagcagagtctggtatgatgcaa
ctgtttagtcagcaccagttacaggaatttttattgtttgaaagggaatgcacattgtac
gcaatggaggctcaggaagaatcatcgatggttgatgcttga
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integrated database retrieval system
