KEGG   Asparagus officinalis (garden asparagus): 109831783
Entry
109831783         CDS       T05243                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109831783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aof03400]
    109831783
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109831783
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 RAWUL WD40_RFWD3 Beta-prop_WDR75_2nd ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 109831783
NCBI-ProteinID: XP_020254790
LinkDB
Position
2:80467495..80481287
AA seq 783 aa
MTGMSSSKSYSANGTLAMHRVGSAGNTSNSSRPRKEKRLTYVLNDADDSKHCAGVNCLTI
LKDSPTDSCNYLFTGSRDGTLKRWLLTDDEASCSATFESHVDWVNDAVLAGNTLVSCSSD
TTVKMWNCLSDGACTRTLRQHSDYVICLAAAGKNSNIVASGGLGGEVFIWDIEAALLPVT
KSVDAAEDESSNGLSSSGNGLPLTSLRTVNSSNNIPVHNNPPHSYNPVAAKGHKDSVYAL
AMNDTGSLLVSGGTEKVVRVWDPRTGSKNMKLRGHTDNIRALLIDSSGRFCLSGSSDSMI
RLWDLGQQRCVHSYAVHTDSVWALASTPTFSHVYSGGRDLSVYLTDLSTRESVLLCKKDH
PVLQLALQDDSIWVASTDSSVYRWPAEGCNPQKVFQRGGSFLAGNLSFSRARASLEGSAP
APVFKEPSMTIPGIPGIVQHEILNNRRRVLTKDAAGSVKLWDITRGIVIEDYGKVDFEEK
KQALFEMVSIPAWFTMDTRLGSLSVHLDTPQCFSAEMYAADLNILGAAEDHKINLAQESL
RGLLAHWMAKRRQRIGAQASSNGDISSARDISLRNLSHSRIEVDDTSENHNTAVLPAFEF
STVSPPSIITEGHGTYGGPWRKKITDLDGTEDEKDFPWWCLDCVLNGRMPPRENTKCSFY
LHPCEGSTIPVITQGKLSAPRILRIHKVINYVIEKIVLDKPLDGGSSDGTFGLGLSAGQS
QLSSIGDGSLRSGLKPWQKVKPSIEILCNNQVLSPEMSLATVRAYIWKKPEDLVLNYRLQ
HSR
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgacaggcatgtcctcatcaaaaagctattcagccaacggtactcttgcaatgcaccgt
gtgggcagtgctggcaacacatccaattcatcacgtcctcggaaggagaaacgattaaca
tatgtgcttaatgatgcggatgactcaaagcattgcgcaggcgtcaattgtctgacaatt
ttaaaggattcacctactgacagctgtaattaccttttcactggaagccgagatggaacc
ttgaaaaggtggttgctgaccgatgatgaagctagctgctcggcaacatttgagtcgcat
gttgactgggttaatgatgcagtacttgccggcaatacccttgtttcatgctcttcagat
acgactgtcaagatgtggaattgcttgtctgatggtgcttgtacacgaacccttcgtcaa
cattctgactatgttatatgcctggctgcagctggaaaaaatagtaatattgttgcatct
ggaggtcttggtggggaggtctttatatgggacattgaagcagcacttcttcctgttacc
aaatctgtcgatgctgctgaagatgaaagttcaaatggactaagtagttccggaaatggg
ttgcctctgacaagtttacgcactgtcaattcaagcaacaacatacctgtgcataacaat
ccaccgcattcttataatcctgttgctgccaaagggcataaagactctgtctatgctcta
gctatgaatgatactggaagtctacttgtttctggtggaacagaaaaggttgtccgtgtt
tgggatccaagaacaggttcaaagaatatgaagctaaggggacatactgataacatacgg
gccttgctgattgattcgagtggcaggttttgtttatcagggtcatcagattccatgatt
cgtctatgggatcttggtcagcaacgctgtgtacattcttatgctgtgcatacagattct
gtttgggcacttgccagcactcccacatttagccatgtttatagtggtgggagggacctt
tctgtatacctaacagatttgtcaacaagagagagtgttttactttgcaaaaaggaccac
cctgttctgcagttggctttgcaagacgatagcatttgggtcgcatcaacggattcttct
gtttaccggtggccagctgaaggatgtaacccacagaaggttttccaaagaggaggttca
ttcttagctgggaatttgtctttttctagggcaagagcttctttggaaggatcagcacct
gcccctgttttcaaagaaccgtccatgacaatacctggaattccaggaatcgtgcaacat
gaaatcttaaacaatagaagacgggtcttgactaaggatgctgcaggttctgttaaactg
tgggatattaccaggggaattgtaattgaggactacggaaaggttgattttgaggagaag
aaacaagcactatttgaaatggttagtattcctgcatggtttactatggatactcgactt
ggaagcctgtctgtccacctggacacgccacaatgcttttctgcggagatgtatgctgct
gatttgaatattttaggagctgctgaagatcacaagatcaatctagctcaggagagtctg
cgtggtctcttggcacattggatggccaaaagaaggcagaggattggagcacaagcatcc
tctaatggtgatatttcatcagcgagggatatatccttgagaaatctttcccattcgagg
attgaggttgatgacacttctgaaaaccataatacagcagtgctccctgcttttgaattc
tcgactgtctccccaccatcaattatcacagaagggcatggtacatatggaggaccttgg
agaaagaaaataactgatttagatgggacagaagacgagaaagattttccatggtggtgt
ctagattgtgtgttgaatggtcggatgccaccgagagaaaataccaagtgtagcttttat
ttgcacccttgtgaaggctcaaccataccggtgatcacccaaggcaaactgagtgcaccc
aggatattgcggatacataaagtaattaactatgtgattgagaaaatagttctcgataaa
ccattggatggaggaagttcggatggaacatttggtttgggattgagtgcaggacaatca
caactttcatctattggagacggctctttgcggtcagggctaaaaccatggcaaaaggtg
aagccatccatagagatcttgtgcaataaccaggtgctgtcacctgaaatgagtttggcc
actgtacgagcttatatttggaagaagccagaagatttggtcctcaattaccgattgcaa
cactcaagatga

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