Asparagus officinalis (garden asparagus): 109831827
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Entry
109831827 CDS
T05243
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109831827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109831827
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109831827
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
109831827
NCBI-ProteinID:
XP_020254865
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Position
2:complement(81719895..81728006)
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AA seq
291 aa
AA seq
DB search
MSSRSSRTLYVGNLPGDIREKEVEDLFYKYGPIKDIDLKIPPRPPGYAFVEFEEAHDAED
AIRGRDGYSFDGHKLRVELAHGGRGHPSPFERHRSYNGGGGGGRGGVSRHSNYRVKVTGL
PSSASWQDLKDHMRRAGDVCFSEVFRDGGGTTGIVDYSNYDDMKYAIRKLDDSEFRNAFS
RSYIRVREYDPKRSLSRSRSRSRSYSRSRSRSRDRSSSRSRGRSKSPKTKSGRCSMSRSR
SKSGSSHSGSKGRRLSGSRSRSRSPVTSPVNGRASQSPKNQSPTRSRSASR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgctcgagcagaaccttgtatgttggcaatctacccggagatattcgagag
aaggaggtcgaagatttgttctacaagtatggacctattaaagatattgatctgaagatt
cctccaaggcctccaggttatgcatttgttgagtttgaagaagctcatgatgctgaagat
gcgatccgtggccgcgacggctatagttttgatggtcataagctacgggtggaacttgcg
catggtggaagagggcacccctcaccttttgaacgtcatcgtagttacaatggtggaggt
ggaggtggccgtggtggtgtctcaaggcattcaaactatcgagtgaaggtgactggtctg
ccatcatctgcatcatggcaagacctgaaggaccacatgcgtcgagctggtgatgtttgt
ttctctgaagtatttcgtgatggcggaggcactacagggatagtagattactctaactat
gacgacatgaaatacgctatcagaaagcttgatgattctgagttccggaatgcattttct
cgatcatatataagggttagggaatatgatcctaaaagaagcttatctaggagtcgcagt
cgtagtcgttcctactcaaggagccggagccgtagtcgtgatcgcagttcaagccgaagc
cgtggccgaagtaaatctcccaaaactaagtcaggacgctgttcaatgtccagatctcgg
tcgaagtccggttcttcacattctggttctaaaggacgccgtctgtcaggatcgcggtca
aggtccagatctccggtaacttctcctgtcaatggaagagcgagccagagcccaaagaat
cagagccctaccaggagcaggagtgcatcaaggtga
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