Asparagus officinalis (garden asparagus): 109831928
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Entry
109831928 CDS
T05243
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109831928
Enzymes [BR:
aof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
109831928
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109831928
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_31
Methyltransf_12
Methyltransf_25
MTS
Motif
Other DBs
NCBI-GeneID:
109831928
NCBI-ProteinID:
XP_020254997
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Position
2:83875792..83880759
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AA seq
390 aa
AA seq
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MTNALSFSSAGGCAANSTTVGGGGDVNVEKRCDFYLSKKRRYCANSPLPDSKFCGNHNPS
SKSRRVPCPIDPSHSVFRENLDAHVKKCPLKKQVETLETQPYYSKGINAGVLGGENVGSE
AKRRAIHEMSVSEFNELVGKIRAFHSALRVELRESFVEPDACKKWINQQVDRQVPYQEKH
VMQQVSIIGNMEEYGILRKTDESVFGTNCQQTIEVDGCGDEDNSPAVVEFGAGRGYLTHM
LADCYETKKIFLVERRSYKLKADRSLRQKDNLSLERLRIDIEDLDLHGVESLKGHKYLAI
GKHLCGPATDLAIRCCIPERQSINKELLSNGCRMRGFAIATCCHHLCQWKHYINTNFMSN
MGITKEDFDAISCCSWACRWKPQALMTFPQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgctctttctttctcgtccgctggcggctgcgccgccaactccaccaccgtc
ggaggcggcggagatgtcaacgtagagaagcgatgcgatttctatctctcaaagaagcgg
cgttactgcgcgaactccccgcttcctgattccaagttttgtgggaaccacaacccttcc
tctaaatctcgcagggtcccctgccccatcgatccttcacattctgtgtttagggagaac
ttggatgcccatgtgaagaaatgcccattgaagaaacaagtggaaaccttagaaacacag
ccctactactctaaagggattaatgctggggttttaggaggggagaacgtcgggtcggag
gcaaagaggagggccattcatgagatgagtgtgagtgaattcaatgagcttgttggaaag
attagggcttttcattcggccttgagagttgagctgagggaatcttttgtggagcctgat
gcttgcaagaaatggataaatcagcaggtggatagacaagtgccatatcaagagaagcat
gtgatgcagcaggtttcaatcattggaaacatggaagaatatggaattctcagaaaaacc
gatgagtcggtctttggaacaaattgtcagcaaacgatagaagtcgatggttgtggagat
gaggataatagcccagcagtggttgaatttggagcagggagagggtacttaactcacatg
cttgctgattgttatgaaacgaagaagatatttttggttgagcgcaggtcttacaagctc
aaggctgatcgaagtctccgtcaaaaggataatttaagcttagagcgattgagaattgac
atagaggatttggatctgcatggagtagaatctttgaagggacataaatacctggccatt
ggaaaacatttatgtggacctgctactgatttggccataaggtgttgtattccggaacgc
caaagcattaacaaggaacttctttccaatggatgtcgtatgcgaggttttgccatagca
acatgctgccaccatctttgccaatggaagcattacataaatacaaatttcatgtccaac
atggggataacaaaggaggattttgatgctatttcatgttgcagctgggcttgtagatgg
aaaccacaggctctgatgacgtttcctcagtga
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