Asparagus officinalis (garden asparagus): 109831953
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Entry
109831953 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome A-like
KO
K12120
phytochrome A
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109831953
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GFIT
Motif
Pfam:
PAS
PHY
PAS_4
HATPase_c
PAS_9
HisKA
PAS_8
PAS_10
Motif
Other DBs
NCBI-GeneID:
109831953
NCBI-ProteinID:
XP_020255036
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Position
2:84244631..84248635
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AA seq
926 aa
AA seq
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MDAAGALQAYKLAANAIKKGQIPVPAGEMETLXTAVVEEVRATGYDRAMAYSFHEDDRRR
LLEVTKLPSHLTRLHYPGHDLXAAVLFMKSKFGXAGCAHPQMIRTRSLPFDITFLRFYAR
APHSCHCPVHGNMNSDRVLVMRLVNEGGEDEGEALAXQQQQGVGKRLLGWAAVHNESGHD
VRSPEIASVPDAVFAIHVTRIDDEHXITEKNIRRTQTLWCXLLREAGPSMXLPRAPTHHL
VRCDGVPSSYENKIWRLGGPTXSEIRDIVLLVAVPTPTRTGLSTTACLMXLSGRFALFLS
RDLVCGRLAAARINSRDILFWFRSHTAAEVRWGGAKHDPSDEDDGRRMHPRSSFKAFLEV
VKTRSLPWSDYEMDAIHSLQLILRGSFNDVKKSEDLDSRVRSLRVQGMEELQAVTNEMVR
LIETATVPILAVDVDGVINGWNLKIAELTGLSVDEAIGKHLLALVEDSSVAQVRRMLLLA
LQGTEEQNVEFQMKTCGDRGDDGPVVLVVNACASRDLNEKVVGVCFVAQDVTFHKSIMDK
FTRIEGDYKSIVLSPNPLIPPIFGADEFGWCSEWNPAMAKLSGWRREEVMDKMLLGEVFG
TNLACCRVKNQDEFVNLSVVINNAMTGHDIDKARFSFIRRNGKPVECLLSVSKKVDREGA
VTGVFCFLHIPSYELQQILHVQQLSEQSTAKRLKALSYIRHAIRNPLSGVMYSRKLMEGT
NLCDEQKRLLNTADKCHLQLNRILDDLDLDNITDSSLELEMTEFVLQDVMVTAISQVMIA
SAGKGIRIIHEASDGFMNEGVYGDSVRLQQIVADFLVVSVQFSPSGGQVEIAPNLVKGRL
GENLHLVHLEIRITHTGSGVPEELLAQMFGSEEEQTDEGVSLLVCWKLLKLMNGDVHYLR
EADKSAFIISAELASASKPRATMNIF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccggggccctccaggcctacaagctcgccgccaatgccattaaaaaaggc
cagatcccagtccctgcgggggagatggagactctgncaaccgccgtcgtggaggaggtt
cgagccaccggctatgacagggccatggcctacagttttcacgaggacgaccggcgacgt
cttctcgaggtcacgaagctgccctcgcaccttactcgcctgcactacccgggccacgat
ctcnaggccgcagttctcttcatgaagagcaaattcggatgagctggctgcgcgcacccg
cagatgattaggacgagaagcttgcccttcgacattacctttctgcggttctacgcgagg
gccccccacagctgccactgcccagtacatgggaacatgaattcggatcgcgtcctggtc
atgcggttggtgaacgaggggggcgaggacgagggggaggctctcgcanngcagcagcag
cagggggtaggaaagaggcttctgggctgggcggctgtgcacaatgagagcgggcatgat
gttcgttcccccgagatcgcttccgttcctgatgcagtgttcgccatccatgtgacaagg
atcgacgacgagcacncgattacggagaagaacatacgccgcacgcagacgctctggtgc
nacctgcttcgagaggccggcccctcgatgtgactgcccagagccccaactcaccatttg
gttagatgcgacggggtgccctcctcttacgagaacaaaatctggcgtctcggcggaccc
acgncatctgagatccgtgacatcgtcctactggtcgcggtacccacgccgactcggacc
ggtttgagcaccacagcctgcttgatgnncctgtccgggcgctttgctctttttttatcg
cgagacctggtctgcgggcgactggccgcggcgaggataaactccagggacatcctcttc
tggttcaggtcgcatactgccgcagaggtcagatggggaggcgccaaacacgacccctct
gacgaggacgacgggaggaggatgcaccctaggtcatctttcaaggctttcctagaggtc
gtgaagacgaggagcctgccctggagcgactacgagatggatgctatccactcgttgcag
ctcatcctcagagggagctttaatgatgtcaagaagagcgaggatttggattctcgggtg
cgcagcctcagggtgcaagggatggaggagctgcaagccgtgactaatgaaatggtgcgc
ttgatcgagacggccactgtgccaatcttggcggtggacgttgatggcgtcataaacggt
tggaacctgaaaattgcagaattgactggcctgtccgtagatgaggccatagggaagcat
ttgctcgcgcttgtggaggactcttccgtggcacaagtaaggaggatgcttcttttggct
ttgcaaggaacggaagaacaaaatgtcgaatttcaaatgaaaacttgcggtgaccgggga
gatgatggtccggttgtcttggttgtgaacgcttgtgctagtcgcgacctcaatgaaaaa
gtcgtcggggtgtgcttcgtggctcaagacgtgaccttccataagtcgattatggacaag
ttcacaaggatcgaaggggattacaaatccatagtgctgagcccaaacccgttgatccct
cccatatttggcgcagacgagtttggttggtgctccgagtggaatcctgccatggctaag
ctgtcaggatggcggagggaggaggtgatggataagatgctgttgggggaggtttttggg
acgaatttggcctgttgccgtgtcaagaaccaagatgaattcgtgaacctcagtgttgta
atcaataatgccatgacaggccatgacattgacaaagctcggttcagttttattagaaga
aatgggaagccagtagaatgtctgctctcagttagcaagaaagtggatcgagaaggagca
gtgaccggggtcttttgttttctccacatccccagctatgaactgcagcagattctccat
gtgcagcagctgtcggagcaatcaacagcaaagagattgaaggccttgtcttatatcagg
catgccattcggaatcctctttcaggtgttatgtactctagaaaactgatggagggaacc
aacttgtgtgacgagcaaaaacgcctcctgaacaccgcggataagtgtcaccttcagctt
aatcggattcttgacgacttggatcttgataacatcacggacagttccttggagctggag
atgacagagtttgttcttcaagatgtgatggttaccgccataagccaagtcatgatagcg
agcgcagggaaaggaattagaataattcacgaggcatctgatggattcatgaacgaaggt
gtctatggggacagcgtgaggcttcaacagattgttgccgatttcttggtggtttctgtt
caattctcacccagcgggggtcaagtggaaattgctcctaatttggtcaaaggtcgcctg
ggtgaaaacctccacctggtacatctggaaatcaggataacacacactggcagcggggtg
cctgaagagctgctagcccaaatgttcggaagtgaggaagagcaaacggatgagggagtt
agcctgctcgtgtgttggaaactgcttaaactcatgaatggagatgttcactaccttcgc
gaagcagacaaatcggctttcatcatctctgcagagctggcttctgcctctaaacccagg
gccacgatgaatatcttttga
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