Asparagus officinalis (garden asparagus): 109832208
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Entry
109832208 CDS
T05243
Name
(RefSeq) la-related protein 6C
KO
K15191
La-related protein 7
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109832208
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
109832208
SSDB
Ortholog
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GFIT
Motif
Pfam:
La
RRM_1
PAM2
Whi3-like_N
RRM_MUD2_C
HENMT1_C
Misat_Tub_SegII
RRM_ACIN1
DUF8400
Pox_A30L_A26L_N
Cas13a_C
Motif
Other DBs
NCBI-GeneID:
109832208
NCBI-ProteinID:
XP_020255232
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All DBs
Position
3
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AA seq
419 aa
AA seq
DB search
MSQERRKDGDISRSSMPKSPGFKFNVHAPEFVPRLTTQVPDSGYFYPYLPFLGNGGYGLG
PDWFYFGDPDPVMFIPDSRPKVTANSRSNDDVSQKIVKQVEYQFSDTNLVASDFLMKIMN
KDPDGYVPMSVIASWKKIKSLGANHQALVKALKTSTKLVVSDDGKKVRRKQLFTERDREE
LQSHIVVVENLPEDYSRQNLEKIFSVVGSVKNIRICHPQEQNTSKSTKGDMVISNKLHAF
VEYETADQADKAVEKLNDERNWRKGLRVRSMLRRSPRSVIRNKRSEFDHFDTISEDDQSP
QSQTSGSSTHVEHTFESSAGAPNPQKLVPCQSEEIPTPTSTKKIRAKSRTKTHGLVHSHS
GRGLLAQSQQQLGAGNPAENSPKSTSQGPRMPDGTRGFTMGRGKPLTMLTTVCFNPIQL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagagaggaggaaagatggagatatcagtagatctagcatgccgaagagcccc
ggcttcaaattcaatgtccatgcacctgagtttgtccctagattgacaacccaggtgcct
gactcaggctatttctacccttatctcccgttccttggcaatggaggatacgggttgggc
ccggattggttctacttcggggatccggatccagtaatgttcatacctgattcgcgaccc
aaggtcactgcgaattcgaggagcaacgatgatgtcagtcagaagattgtcaagcaggtc
gagtaccaattcagtgatacaaatctggttgccagtgattttttaatgaagatcatgaat
aaagatcctgatggttatgttcctatgtctgtaattgcatcttggaagaagataaaatct
cttggtgcaaaccaccaggcacttgtaaaagcactcaagacctccacaaagcttgttgta
agtgatgatggtaaaaaagtcaggcgcaaacagctcttcacggaaagagacagagaagaa
ttgcagtctcatattgtggtggtagaaaatttgcctgaagattattcacgacaaaatctt
gagaagatatttagtgtggttgggagtgtgaagaatatcagaatatgtcatccacaggag
cagaatacttctaaatctacaaagggtgatatggtcatcagtaacaagttgcacgcgttt
gtggaatatgaaacagccgatcaagctgacaaggcagttgagaagctaaacgatgagagg
aactggaggaagggccttcgagttaggtcaatgcttagacgctcgccaagatcagtgata
agaaacaagaggtcagagttcgatcattttgatacaatctccgaagatgatcagtcacca
caatctcagacatcagggtcatctacacatgtagaacatacctttgaaagcagtgccgga
gctcccaacccccaaaaacttgtgccttgccagtctgaagaaattccaactccaacaagt
acaaagaaaattcgggcaaaaagccgcacaaaaactcatggtctagtccatagccatagt
gggcgcggtcttctcgctcagagtcagcagcaacttggtgcaggcaaccctgctgaaaat
tcaccaaagtcgacttcccagggaccaagaatgcccgatggaactcgtggattcaccatg
ggccgtggaaagccacttacgatgctaaccactgtttgtttcaacccaattcagctctga
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