KEGG   Asparagus officinalis (garden asparagus): 109832605
Entry
109832605         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-3A-like
  KO
K03869  cullin 3
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109832605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aof04121]
    109832605
   03400 DNA repair and recombination proteins [BR:aof03400]
    109832605
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     109832605
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109832605
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 WAC_Acf1_DNA_bd HTH_IclR
Other DBs
NCBI-GeneID: 109832605
NCBI-ProteinID: XP_020255562
LinkDB
Position
3:1843466..1846163
AA seq 675 aa
MVLHKHGEKLYSGLLATMTWHLKEIAKSIEAAXGGLFLEELNRKWCDXNKALQMIRDILM
YMDRTFVPVTNKVPVHELGLNLWRDHVIHSSQIQNRLLITLLELIQDERMGQVINRGLMR
NITKMLMDLGSSVYQEEFERPFLEISASFYKTESQTFVECCDCGEYLNRAEKRLNEEIER
VSHYLDPKSEAKLTDVVEREMITNYMQRLVHMENSGLVNMLIDDKYEDLSRMYCLFRRVS
GGLSIIRDVMTSHLRETGKQLVVDPERLKDPVDFVQRLLDQKDKYDKIISTSFNNDKTFQ
NALNASFEYFINLNNRSPEFISLYVDDKLRKGLKGVSEEDVEIVLDKVMMLFRYLQEKDV
FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDLRTSEDTMRDF
YASQSSEIGDGPTLGVQILTTGSWPTQPSPACNLPTEILGVCERFKSYYLGTHTGRRLTW
QTNMGTADIKATFGKGQKHELNVSTYQMCILMLFNSCDRLNYKEIEQATEIPASDLKRCL
QSLACVKGKNVLRKEPMSKDIVEDDAFYFNDKFTSKFIKVKIGTVAAQKESEPEKQETRQ
RVEEDRKPQIEAAIVRVMKSRRVLDHNNIVTEVTKQLQARFLPNPVVIKKRIESLIEREF
LERDKSDRKLYRYLA
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggtgcttcacaagcatggtgagaaactatactctggactattagcaactatgacatgg
cacttaaaagaaatagcaaaatccatagaggcagctncaggtggtttgttcttggaagag
ctgaaccgcaagtggtgtgatncaaataaggcacttcagatgatacgtgatatactaatg
tacatggataggacatttgttcctgttaccaacaaggtacctgttcatgagctaggcctc
aatctatggagggatcatgtcattcactcaagtcagatccaaaacaggttgctcatcact
ctcctcgaactcatacaggacgagcgaatgggtcaagtaataaaccgaggattgatgagg
aacataactaaaatgttgatggatttgggatcttctgtatatcaagaagagtttgagagg
cctttcttagagatctctgctagtttttacaaaaccgagtctcaaacctttgttgaatgc
tgtgattgtggtgaatacctcaatagagctgaaaagaggcttaatgaagaaatagagagg
gtttcacactacttagaccccaaaagtgaagctaaattaacagatgtagtggagagagag
atgatcacgaactacatgcagaggttggttcacatggagaactctggccttgtaaatatg
cttattgatgacaaatatgaagatcttagcagaatgtactgtttgttccgtcgagtttct
ggtggtctctcgataatcagagatgtgatgacatctcaccttcgcgaaacagggaagcag
cttgtagtagatccagagagattaaaggatcctgtggactttgttcaacgccttttagat
cagaaagataaatatgataaaatcatcagcacttcattcaacaatgacaagactttccag
aatgctttaaatgcctcgtttgaatacttcatcaatctcaacaacagatctcctgaattc
atctccttatatgttgatgataaactccgtaaaggcctcaaaggggtgagcgaagaggat
gttgagattgtccttgacaaagtgatgatgttgtttaggtacttacaggagaaggatgta
tttgagaaatattataagcagcacttggcaaagcggcttctttcgggtaaaactgtttct
gatgatgctgagagaagccttatagtaaaactgaagacagagtgtgggtatcagtttact
tcaaaacttgaaggcatgttcacagatttgaggacctctgaagatactatgcgggacttc
tacgctagtcaatcttctgagattggagatggcccaactttgggggtgcaaattcttaca
actgggtcttggccaacccagcccagtcctgcatgcaaccttcccactgaaatccttggc
gtatgtgagaggtttaaatcatattaccttggaactcatactgggcggaggttgacttgg
caaacaaatatgggtacagccgatatcaaagcaacctttggcaagggccagaagcatgag
ctgaatgtttctacataccagatgtgtatcttgatgctgttcaattcatgtgatcggctg
aactacaaagaaatagaacaagccacggagatcccggcttctgatcttaaacggtgcctt
caatcccttgcttgtgttaaaggtaagaacgtgcttcgaaaggagccaatgagcaaggac
attgtagaggatgatgccttctatttcaatgataagtttacaagtaagttcattaaggta
aagattggtacagtggcggctcagaaggaatctgaacctgagaagcaggagactcgccag
agagtggaggaggacaggaagcctcagattgaggctgccattgtaagggttatgaaatct
aggagggtattagatcataataacattgtaacagaggtgacgaagcagttacaggcaagg
tttctgcctaacccagtggtgataaagaagaggatcgaatctctaattgagcgggagttc
ttagaaagggataagtctgataggaaactgtatcgataccttgcctaa

DBGET integrated database retrieval system