Asparagus officinalis (garden asparagus): 109832702
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Entry
109832702 CDS
T05243
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K23358
transcription initiation factor TFIID subunit 1, fungi type [EC:
2.3.1.48
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109832702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109832702
03036 Chromosome and associated proteins [BR:
aof03036
]
109832702
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
109832702
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109832702
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
109832702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
ubiquitin
Rad60-SLD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
109832702
NCBI-ProteinID:
XP_020255692
LinkDB
All DBs
Position
3:4113791..4125241
Genome browser
AA seq
881 aa
AA seq
DB search
MVILKFSEIFGIHEPLRKTERKDQHRHSISKDRVKVADSVDVEEDEEVFLRSSCHDFSRI
KYPISTVSEVDVDIHHATSGVEEQMKDSCLFAQPMKDDDFTMDVFACQWSSRSPNVYPLD
QQDWEDAIVWGNSPTASHGCSESCVISELSAGINTDAEVEDRHAHKTIECDNKDNHLLID
PVLVEPFGSKKEVSESTCRSSYCDYHPQLLRLESLHEKNDVPSVEMDKENQTEGSRRGDI
MHRFNKLSLQNKDLLDGSWLDQVIWDPDDAIPKPKLILDLQDEQMLFEIFDHKDSEHICS
HAGAMVMMRPPSYYLGDSFDLHNQGMPSVGRFNISNDKYYSNRKTSQQAKSHTKKRSFHG
IKVMHSIPALKLQTMKPKLSNKDIANFHRPKALWYPHDNEAMAKAKGMLCTSGLIKIIII
SLGGGKGVKLHINADETLSTIKSKASKKLDFKPSEKVKVFYSGKELKDDKSLALQNVHPN
SVLHLVRTKVHLWPRAQKLPGENKPLRPPGAFKKKSDLSVKDGHVFLMEYCEEKPLLLGN
VGMGARLCTYYQKMAPGDQTASTLRNGNDGLGTVLPLEPSDKSPFLGDVGPGCSQSCLET
NMYRAPLFPHKSSSTDYLLVRSAKGMLSLRRIDKLYSVGQQEPHMEVLSPGSKSIQTYLL
NRMLVYVYREFRANEKPDILPLIRADDLASKFPGLTDAIVRKRLKHCADLRKGKNGMLVW
VKRHDFRIPLEDELRRMLSPENVCSYESMQAGLYRLKRLGISRLTHPVGLSSAMNQLPDE
AIALAAASHIERELQITPWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSYVRAI
PKAPISNTTMKKKAASAKVGSTVTGTDADLRRLSMDAAREV
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcttaaagttttctgaaatcttcggcatccatgaacctttgaggaaaacagag
agaaaggaccagcatagacattctataagtaaagatagggtcaaagttgcagactctgtt
gatgttgaagaggatgaggaggtatttctgaggagctcttgtcatgatttctctaggatt
aaatatcctatctcaactgtcagcgaagtggatgttgatattcaccatgcaacctctggt
gttgaagaacaaatgaaagactcgtgtctttttgcacaaccaatgaaggatgatgatttt
acgatggatgtctttgcatgccaatggtcctctaggagtcctaacgtctatcctcttgat
cagcaagactgggaagatgcaattgtttggggaaattcacccacagctagtcatgggtgc
tcagagagttgtgtgatatctgaacttagtgcaggaattaatactgacgctgaagtagaa
gatagacatgcacataaaaccattgagtgtgacaataaggataatcatctgcttattgat
ccggttttagtcgagccatttggttcaaaaaaagaagtttcagaatcaacatgccgttcc
tcatattgtgattatcaccctcagttgctgaggttagagtccctccatgaaaagaatgat
gtgccttctgtagaaatggacaaggagaatcaaactgaaggaagccgcagaggtgacata
atgcatcgctttaataaactttccttgcagaataaggacttgttagatggatcttggctg
gaccaagttatctgggaccctgatgatgctattccgaagccaaagctcattcttgatctt
caagatgagcaaatgctctttgaaatttttgatcacaaggatagtgaacatatttgctct
catgctggtgctatggtgatgatgcgcccgccaagttattatctaggagattcttttgat
cttcataatcagggaatgccgtctgttggtcgcttcaacatttctaatgacaaatattat
tctaacaggaaaacctcccagcaggcaaaatctcatacaaaaaaacgatctttccatggg
attaaggtcatgcattcaattcctgctttgaaactacaaactatgaagcccaagttgagc
aacaaggatattgccaattttcacagacctaaagcattgtggtatcctcatgataatgaa
gctatggccaaggcaaaaggaatgctttgcacaagtgggctcataaaaattataattatc
agtttgggtggaggaaaaggggtaaagcttcatattaatgcagatgaaactttgtctact
atcaaatcgaaagcatcaaagaaactagatttcaaaccttcagaaaaggtgaaggtcttt
tattctggaaaagagcttaaggatgacaagtccctggcactccaaaatgtacatccaaat
tctgtgcttcatcttgtgcgcacaaaggttcatctttggccaagggcccaaaagttgcct
ggtgagaataagcctctgcgtccgcctggggcttttaagaagaaatctgacttatctgtg
aaagatgggcatgtttttctgatggagtactgtgaagaaaaacctttattgcttggaaat
gttggtatgggggctagattgtgcacttattaccaaaaaatggcacctggtgaccaaact
gcttcaacgcttcgaaatggcaatgatggcttggggactgttctcccacttgagccttcc
gataaatctccttttcttggggatgtgggtcctggttgcagccaatcttgtcttgaaaca
aatatgtatcgtgcaccgctatttccccacaagtcatcttccacagattatcttttagtt
cgctcagcaaaagggatgttgtcacttcggcgcattgataaattatattctgttggacaa
caggaacctcacatggaagtattgtcaccaggatcaaaaagcattcaaacatatcttctg
aacagaatgttagtatatgtctaccgagagtttcgtgccaatgagaaaccagatatcctt
cctcttattcgggctgatgatttggcgtcaaagtttcctggtctgacagatgctattgta
cgtaaacgattgaagcattgtgcagacttaaggaaggggaaaaatggtatgttagtttgg
gttaaaagacatgattttcgtattccattggaggatgaattgcgaagaatgttgtcacca
gagaacgtgtgctcttatgaaagtatgcaagctggcctataccggctcaaacgcttagga
attagcaggcttacccatcctgttggcctttcttctgcaatgaaccagctgcctgatgaa
gctattgctctagctgctgcatcacatattgaaagggaactgcagataacaccatggaat
cttaccagcaattttgtcgcttgtacaaaccaggataaggagaatattgagcgattggaa
attacaggtgttggtgatccttctggtcgtggattaggatttagctatgttcgtgcgatt
ccaaaggctcccatttcaaacacaacaatgaagaaaaaggcagcttctgcaaaagtaggt
tcaacagtcactggcacagatgctgatctgagaagattgagtatggatgctgcacgtgag
gtatag
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