Asparagus officinalis (garden asparagus): 109832799
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Entry
109832799 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109832799
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109832799
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
109832799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zinc_ribbon_16
Arc
zf-C3HC4_3
zf-Nse
PHD
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
109832799
NCBI-ProteinID:
XP_020255812
LinkDB
All DBs
Position
3:6714121..6715630
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AA seq
349 aa
AA seq
DB search
MAIVIVVLISAFFFLGFFSIYIRQCAGDRRGSEASNAPQPRRQRPLPSPARTRPGDPRDF
PTLVYSDVRDHKLGKAXLECAVCLSEFDDDESLRLLPRCDHVFHPDCIDAWLAAHVTCPV
CRCNLEEPPADPQPEIGQIDRTNANAARPEPEPQQVAIQVGPAEEDEERKAEIENLEKFV
NTKRARSRARPARFPRSHSTGHSLVMPGENLDRFTLRLPTNIRKEIVERAEMMQRAKSLG
VYPAEGSSRRGGGGGGGRSIQLGRSDRWGSFLMRTLSMKMTNWGRRGDGDGSSLIRGSSS
IRGGFFRRGDSIKGEGSTKGGGVKFNAFDCYGGAATKSEESQSSAFNRV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgtcatcgtcgtcctcatctccgccttcttcttcctcggcttcttctccatc
tacatccgccagtgcgccggcgaccgccgcggctccgaggcctccaacgccccgcaaccg
cggcgccaacgcccgctcccgtcgccagcgcggactcgacccggcgatcctcgcgacttc
ccgaccctcgtctattccgacgtccgggaccacaagctcggcaaggctncgctggagtgc
gccgtatgcctgtcggagttcgacgacgacgagagcctccgcctcctccctcgctgcgat
cacgtgttccatcccgactgcatcgacgcctggctcgccgcccacgtgacctgccccgtc
tgccgctgcaacctagaagaaccccccgcggacccgcagcccgaaatcggccaaatcgac
cgaacaaacgcgaacgccgctcggcccgaacccgagcctcagcaggtggcgattcaagtc
ggcccagccgaagaggacgaagagaggaaggccgagatcgagaacttggaaaaattcgtc
aacacgaagagggcgcggtcgagggctcgaccagcgaggttcccgcggtcgcactcgact
gggcactcactagtgatgccgggggagaatctcgataggttcactcttcgattgccgacg
aatattcgaaaggagatcgtggagagggcggagatgatgcagagggcgaagagcttgggg
gtctacccagctgagggaagctcgaggcgaggaggaggaggaggaggagggaggagcata
caactggggaggtccgatcgatgggggtcgttcttgatgaggacgctctccatgaagatg
acgaattgggggaggagaggggacggcgatgggtcgtcgttgattagggggtcgtcgtcg
attaggggcgggtttttccggcgaggggattcgattaaaggcgaggggtctacgaaagga
ggaggtgtgaagttcaatgcttttgattgctacggcggagcggcgacgaagagcgaggag
tctcaatcgtcggcgtttaatcgggtgtga
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