Asparagus officinalis (garden asparagus): 109832946
Help
Entry
109832946 CDS
T05243
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03030
DNA replication
aof03410
Base excision repair
aof03420
Nucleotide excision repair
aof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109832946
03410 Base excision repair
109832946
03420 Nucleotide excision repair
109832946
03430 Mismatch repair
109832946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aof03032
]
109832946
03036 Chromosome and associated proteins [BR:
aof03036
]
109832946
03400 DNA repair and recombination proteins [BR:
aof03400
]
109832946
DNA replication proteins [BR:
aof03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109832946
DNA Replication Termination Factors
ELG1-RFC complex
109832946
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109832946
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109832946
Check point factors
HRAD17(Rad24)-RFC complex
109832946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
RuvB_N
Mg_chelatase
AAA_5
AAA_22
DUF815
nSTAND3
AAA_11
ABC_tran
AAA_16
AAA_2
AAA_24
AAA_29
AAA_23
POC1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
109832946
NCBI-ProteinID:
XP_020256035
LinkDB
All DBs
Position
3:complement(10538312..10553281)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPRTLDKVIVHDDIASNLKKLVSEQDCPHLLFYGPPGSGKKTLIMALLKQMFG
PGAEKVKMENKAWKIDAGSRTIELELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
CLNIRVNAPTNDQIVKVLEFIGKKEGLQLPAGFAARIANHSNRSLRRAVLAFETCKVQQY
PFTVDQGIPPLDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIILKKLLSE
LLKKLDSELKHEICHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKGFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtcgacaagtacaggccgagaaccctagacaaggtcatcgtccacgatgac
atcgcctcaaacctcaagaaattggtttcggagcaggactgtccccatctcctcttctat
gggccgcctggttccgggaagaaaaccctaatcatggctctactcaagcaaatgtttggt
cctggagctgaaaaggtgaagatggagaacaaagcttggaaaatcgatgctggatcccga
actattgaactagaactgactacactgtcaagtacacaccacgtggagctgaatcccagt
gatgcaggctttcaggataggtatattgttcaggagatcatcaaggaaatggcgaaaaac
agaccaattgatactaaaggcaaaaagggtttcaaagtattagtgctgaatgaagtcgat
aagctctctagagaagcccaacattctctcaggagaacaatggagaagtatagtgcatcg
tgcaggctaattttatgctgcaacagttcttcaaaagttactgaagctgttagatctcgc
tgtctcaatatccgtgtcaatgcccccactaatgatcagattgttaaagttttggagttt
attggcaagaaagaaggtctacagctgcctgctggatttgcagctcgtattgcaaatcat
tcaaaccgtagtttgagaagagcagtattagcttttgagacctgtaaagtgcagcaatat
ccattcactgttgatcagggaatcccgcccttggactgggaacagtatgtttcagaaata
gcatctgatataattaatgagcagagtccaaaaaggttgtttttagttcgtggaaaatta
tatgagctgcttgtcaattgcatccctcctcaaatcattctaaagaaattgctgtcagag
ttattgaaaaaattagactctgaattgaagcatgaaatttgtcattgggctgcatactat
gaacacaggatgtgtcttgggcaaaaggccatatttcacatagaagccttcgtagcgaaa
ttcatgagtatctacaagggcttcctcattgcaacatttgggtaa
DBGET
integrated database retrieval system
