Asparagus officinalis (garden asparagus): 109833000
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Entry
109833000 CDS
T05243
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109833000
Enzymes [BR:
aof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
109833000
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109833000
Prokaryotic type
109833000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
109833000
NCBI-ProteinID:
XP_020256113
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Position
3:complement(11558911..11586061)
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AA seq
720 aa
AA seq
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MRGITSLIGPSLSPAALFSLLPLKPFPSPKPSFSPSSSSRTLAMAKTLDESDVGISCYVS
SLPGLRGVLKQRYADFIVNEVDRDGNIVHLTSFDLALDCSEDKEEGKPIADDKSYVKEIE
LFRSLCGEKDSELLKGFLDKITPGEENDVEPIVLSPDSDKSHRTEVHNFFKKNFKFLVTD
TVEGLEGSLKCVRVRLSSGAGERGKKRKNSGSSSDARPFDSRGSDNWPDHLGKFLRFHLY
KENKDTQEALAVIAKMLGIQQRSFGFAGTKDKRAITTQRVTIFKQHPKRLAALNNKLCGI
KVGDFSYVKEGLMLGQLSGNRFTITLRGVIADSVDTIKAAAEGLEKNGFINYYGLQRFGS
GSVPTHLIGAALLRGEWKSAVDLILDPREGERAETRAVREQYKETGDIDLALRHLPRYLV
AERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSFLWNHAASLRVQKYGIGQVVLGD
LVLYKEDSAGMVADEDNVETEDDCHGDISLASNIVEKGHFVKVVKSEDISAGCYTFEDVV
LPLPGSRILYPENDIADIYHRMAEKDGVKLAESVHSAKEFSITSMTGSYRRVFQRPIDFV
WELLTYTDGDVPLAETDMDVISKSKPYEDGKIQGCANGNHDSKVEVCQPESLSLIADCLS
ANASGVNLSCEDPGDKSGAHLPKVALKLGFTLPSSCYATMAIRELLKTSTSVAYHKTINQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcatcacgtccctcatcggcccctctctctccccggccgcccttttctctctc
cttcccctaaaacccttcccctctccaaaaccctcgttttctccttcctcaagctcgcga
accctagccatggcgaaaaccctagacgaatccgacgtcggcatctcctgctacgtctcc
tccctccccggcttgcgcggcgtcctcaagcaaaggtacgccgatttcatcgttaatgaa
gttgatcgcgatggtaacatcgttcatctcacctcattcgatctcgcactcgattgttct
gaagacaaggaagaagggaaaccgatagcagacgataaaagttacgtgaaggagattgaa
ttatttcgttctctttgcggtgagaaggattctgagctgctgaaggggtttcttgataag
attacacctggtgaagaaaatgacgtcgagccgatagttctttcaccggattcagataaa
tcacatcgaacagaagtgcacaacttcttcaagaagaatttcaagttcttggtgactgac
acagttgaaggattagaggggagcttgaagtgtgttagagtgaggttaagttcaggagct
ggtgaaagagggaagaaacggaaaaattcgggcagttcaagtgatgctaggccattcgac
agtagagggtcggataattggcctgatcatcttggcaaatttttgaggtttcatctttac
aaggaaaacaaggatacccaagaggctctagcagttatagcgaagatgctaggcattcag
caacgctcatttggatttgctggcacaaaagataaacgtgctataacgactcaaagggtg
accatattcaagcagcatccaaagaggctggctgcattgaacaacaaattatgtggtata
aaggtaggagattttagctatgtgaaggaaggacttatgcttggtcaactctcaggaaat
cggttcactattactttaaggggtgtcattgcagattctgtagataccataaaagcagcc
gcagagggcttggaaaagaatgggttcatcaactattatggtttacagcggtttggaagt
ggttcggtgccaactcatctcattggtgcggcattacttcgaggagagtggaagagtgct
gtggatttgattcttgatccacgtgaaggggagcgtgctgagacaagggctgtgcgagaa
caatacaaggaaactggtgatattgatttggctttaaggcacttacctcgttatctggtt
gctgagagggctattctacaatgtctgaagaaatgccctggaaactatctgcaagcatta
aagggtattccaagaactctgagaatgatgtacgtgcacagctatcaaagcttcttgtgg
aaccatgcagctagcttgcgagtgcaaaaatatgggattggccaggttgtactaggagat
ctggtcctgtataaagaggattctgctggaatggtagctgatgaagataatgttgagact
gaagatgattgtcatggtgacatttctttggcgtcgaatattgtagaaaagggccatttt
gtcaaggttgtaaaatctgaagatatatcagcaggttgttatacatttgaagatgttgta
cttcctttgcctggttcaagaatactctacccagaaaatgacattgctgacatataccat
aggatggcagaaaaggatggtgtcaaattggcagagagtgtacacagtgccaaggagttc
tcaattaccagtatgactggaagctatagaagggttttccagcgtcctattgactttgtg
tgggaattactaacttacacagatggagatgtgcccctggcagaaactgatatggatgtc
atatccaaatcaaagccttatgaggatgggaagatacagggatgtgctaatggaaatcat
gacagcaaagttgaagtctgccaacctgagagcttgagcttaattgctgattgtctttct
gcaaatgctagtggagtgaatttgtcgtgtgaggaccctggtgacaaatctggcgctcac
cttcccaaggtagctttgaagttagggttcactctcccaagttcatgctatgccacaatg
gccattagggagttgctgaaaacttcaacttcggttgcttatcataaaacaataaaccag
tga
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