Asparagus officinalis (garden asparagus): 109833243
Help
Entry
109833243 CDS
T05243
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 3-like
KO
K14485
transport inhibitor response 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109833243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109833243
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109833243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
109833243
NCBI-ProteinID:
XP_020256431
LinkDB
All DBs
Position
3:18613110..18619446
Genome browser
AA seq
583 aa
AA seq
DB search
MDIEEKLLGLRISPFPDKFLDRILSFVDSRKDRSAVSLVSKDWYDAERGSRTHVFIGNCY
SVSPEIVARRFPNIRSFTIKGKPRFSDFNLVPPNWGADIHSWLEVFASAYPFLEELRLKR
MRVTDESLDFLARSFPGFKALSLVSCDGFSTNGLASIVGGCRNLTELDIQECMIDDLDGS
WLSSFPESVTSLEVLNFAHLTSEVDFDDLERLVERCKSLKVLKVNKNVTQKQLWRLLMRA
PQLIELGTGSFSQDHALPADAQLETVFSNCKNLNTLSGFWAVSSLYLPLLYPACANLSFL
NLSYAPLQSTQLAKILPHCPLLRRLWVLDTVEDEGLEAAGSSCHLLEELRVFPADPFDQD
DLLDGSGNGVTESGFVAVSEGCPKLHYVLYFCRRMTNAAVATVVRNCPNFTHFRLCIMTT
CVPDYLTNEPMDEAFGAVVKTCTKLQRLSVSGLLTDLAFEYIGIYAKNLEALSVAFAGSS
DKGMQFVLKGCPKLRKLEIRDCPFGNAALLSGIERYESMRSLWMSACNVTMNGCRLLARE
MPRLNVEVIKENESNETEEAEKVYVYRSVAGPRRDAPPFVITL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggacattgaggagaaactcctagggctccgaatctcccccttccctgataaatttcta
gaccgcattctgtcttttgtcgattcgcgtaaagatcgcagtgcggtttctttggtctcc
aaggattggtacgatgcagaaagagggagccgaacccatgtctttattggcaactgttat
tccgtgtctccggagattgttgcccgtaggtttccgaatattcggagtttcaccattaaa
gggaaacctcggttctcagacttcaatcttgttcctccaaattggggagctgatatccac
tcctggcttgaagtttttgcttcagcttatccgtttcttgaggaactgcggcttaagagg
atgcgtgttactgatgagagccttgatttcttggctcggtcatttccagggttcaaagca
ctgtcacttgttagctgtgatggcttcagcaccaatggtcttgcctccatcgtgggcggt
tgcaggaacttgactgagctagatatacaggaatgcatgattgatgatcttgatggtagc
tggttaagttcttttcctgaaagtgtcacgtccctggaagtgcttaattttgctcatctg
acttctgaagtggattttgatgacttggagaggcttgtggaaagatgcaaatcactaaaa
gtcttaaaagtgaataagaatgtcacacagaagcaactttggagactgctgatgagagct
ccacagcttatagaactgggaactggttcattctcacaagatcatgctcttccagcggat
gctcagctggaaactgtatttagtaattgcaaaaatttgaatactctttcgggtttttgg
gcagtttcctctctttatcttccattattgtacccggcctgtgcaaatctgtcattcttg
aatttgagttatgcacctctgcaaagcacacaacttgcaaagatcctgccacattgtcct
ttgcttcgaaggctttgggttctagacactgtagaggacgaaggactagaagctgcgggg
tccagttgtcatcttcttgaagaactccgggtatttccagcagacccattcgatcaggat
gaccttttggatggtagtggcaatggtgttactgaatctggttttgttgcagtttcagag
ggatgtccaaaacttcactatgttctatacttctgccgtcggatgactaatgctgctgta
gctactgtagttcgtaactgtcccaactttacccacttccgcctttgtataatgaccaca
tgcgtacctgattacctcaccaatgagccaatggatgaagcatttggtgcagttgtgaag
acctgtactaaacttcaaagactttctgtttctggtcttctcacagatctagcctttgag
tacattggcatatatgctaaaaaccttgaggccttatcagttgcttttgctggaagcagt
gacaagggaatgcagtttgtgttgaagggatgcccgaagttgagaaagctggaaataaga
gactgtccatttggaaatgcagcattgctttcagggattgagaggtatgagtccatgagg
tctctttggatgtcagcttgcaatgtgacaatgaatggctgtcgattacttgcaagggag
atgcctaggttgaatgtggaggttatcaaggagaatgagagcaatgaaactgaggaagct
gagaaagtttatgtgtatcgttctgttgccgggccaaggagggatgctcctccttttgtc
atcaccctctaa
DBGET
integrated database retrieval system
