Asparagus officinalis (garden asparagus): 109833330
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Entry
109833330 CDS
T05243
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109833330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109833330
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109833330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
109833330
NCBI-ProteinID:
XP_020256556
LinkDB
All DBs
Position
3:21466768..21482435
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AA seq
791 aa
AA seq
DB search
MLVDAGVEDEEKCLAEGIAGLQQNAFYMHRALDSNNLRDALKFSAQMLSELRTSRLSPHK
YYELYMRAFDELRKLEMFFREETKSRCSVIDLYELVQHAGNILPRLYLLCTVGSVYIRSK
EAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVIDAVEFV
LQNFIEMNKLWVRMQHQGPAREKEKREKERNELRDLVGKNLHVLSQIEGVDLDMYKETVL
PRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLM
DRLSNYAASSAEVLPEFLQVEAFAKLSNAIGKVIEAQVDMPVVGVITLYVSLLTFTLRVH
PDRLDYVDQILGACVKKLSGKGKLEDSRATKQIVALLSAPLEKYNDIVTSLNLSNYPKVM
DHLDTATNKVMAVVIIQSIMKNNTCISTADKVEALFELMKGLIKDIDGTLDDELDEEDFK
EEQNSVARLIHMLYNDDPEEMLKIICTVRKHILLGGPKRLAFTVPPLVFSALKLVRRLQS
QDGDVAGEEVPATPKKIFQILHQTIEALSSVPSPELSLRLYLQCAEAANDCDLEPVAYEF
FTQAFILYEEEVADSKAQVTAIHLIIGTLQRMQVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMASATRGGSGPVSLFVEIL
NKYLYFFEKGNPQITSSVIQGLIELITTEMQNDNSPSDPSADAFFASTLRYIHFQKQKGG
AMGEKYEPIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgacgcgggcgttgaagacgaggagaagtgtttggccgagggcatcgccggc
ctccagcaaaatgccttctacatgcaccgcgctctcgattccaacaacctgagggacgct
ctcaagttctccgctcagatgctctccgagctcaggacttctcgcctttctcctcacaaa
tactacgagctctatatgagggcgtttgatgagctgaggaagctggagatgttcttcaga
gaggagacgaagagcagatgctccgtgatcgatctctacgagctcgtgcagcatgccggc
aacatcttgcctagattgtatctcctctgtacagtaggatctgtatacataagatcgaag
gaggctcctgctaaggatgttctcaaggaccttgtggaaatgtgtcgtggcatacaacat
cctgttcgtgggcttttcttgaggagctatctctctcaagtaagcagggacaagttgcct
gatattggatcagagtatgagggggatgcagatactgttatagatgccgttgagtttgtc
cttcagaacttcatagagatgaataaactctgggtcaggatgcaacatcagggacctgcc
agggagaaggagaagcgggaaaaggagaggaacgagctccgtgatcttgttggcaaaaac
ctgcatgtacttagtcagatagagggtgttgaccttgatatgtacaaagaaactgtactt
cccagagtattagagcaggttgttaactgtaaagatgagctagctcagtattacttgatg
gactgtataattcaagtcttccctgatgaataccacttacagactctcgaaacattgttg
ggcgcatgccctcagcttcagccaacagtcgatatcaagacagtgctgtctcaacttatg
gacagattatcaaattatgctgcttcaagtgcagaggtcttgccagaattcttgcaagtt
gaagcttttgccaaattaagcaatgctattgggaaggtcattgaagcacaagttgatatg
cctgttgttggagtaataactttatatgtgtcgctccttacgttcactcttcgtgttcat
cctgaccgtcttgattatgtcgatcaaatactgggtgcatgtgttaagaaactttcaggc
aaaggaaagcttgaggatagcagagcaactaagcaaattgttgcacttttgagtgccccg
ttggagaagtataacgacattgtcacttctttgaatctttcaaactatccgaaagtcatg
gatcatcttgacactgctacaaataaagtcatggcagtggtcattatccaaagtataatg
aagaacaacacctgcatatctactgcagataaagtggaagctttatttgaactaatgaaa
gggcttatcaaggacatcgatgggactctagatgatgagcttgatgaagaggacttcaag
gaggaacagaactctgttgctcgtcttattcatatgttatacaatgatgatcctgaagag
atgctgaagattatatgcactgtgaggaagcatattcttcttggtggaccaaaacgtctc
gctttcactgtacctccccttgtgttttctgccctgaagttggtaaggcgtttgcaaagc
caggatggagatgtagctggagaagaggttcccgcaacaccaaagaaaatatttcagatc
ttacatcagaccatagaggcattatcatctgttccgtccccagaactttccctaaggctg
tacttgcagtgtgctgaggctgctaatgattgcgatctagaacctgttgcatatgagttc
ttcactcaagcatttattctttatgaagaagaagttgcagattcaaaagcacaagtgact
gctatacatttaataataggaacccttcagcggatgcaagtttttggagttgagaacagg
gacacattgacacataaagccacagggtattccgcaaagcttttaaagaaaccagatcag
tgcagagcagtgtatgcatgctcacatctcttctgggttgatgatcaagatggaatcaag
gatggagaaagggtcctcctctgcttaaagcgcgccttgagaattgcaaatgctgctcaa
cagatggccagtgcaacacggggtggcagtggacctgtctcattgtttgttgaaatattg
aacaagtacctatacttttttgagaaaggaaatcctcagatcacgagttctgtaatccag
ggtttgattgaattgatcacaactgagatgcaaaatgataattcaccatcagatccatct
gctgatgctttctttgctagcactctaagatacattcatttccagaagcagaagggtggt
gctatgggtgaaaaatatgagcccataaaggtttga
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