Asparagus officinalis (garden asparagus): 109833377
Help
Entry
109833377 CDS
T05243
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00100
Steroid biosynthesis
aof00909
Sesquiterpenoid and triterpenoid biosynthesis
aof01100
Metabolic pathways
aof01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109833377
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109833377
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aof01006
]
109833377
Enzymes [BR:
aof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109833377
Prenyltransferases [BR:
aof01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109833377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
109833377
NCBI-ProteinID:
XP_020256617
LinkDB
All DBs
Position
3:22789764..22803352
Genome browser
AA seq
403 aa
AA seq
DB search
MGLIGTMLEHPEEAYALMKLKIAASKISKQIPPEPHWGFSYTMLQKVSRSFALVIQQLET
ELRNAVCIFYLVLRALDTVEDDTSIPAEVKVPILQSFHRHIYDRDWHFSCGTKEYKVLMD
KFHHVSTAFLELGKSYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYANKL
EDFKYEENSXXXXITNALLHGEDCLQYMAGLKDTAIFRFCAIPQIMAIGTLALCYNNLEV
FRGVVKMRRGLTAKVIGQTRMMSDVYGAFFEFSALLKSKVDESDPNAALTHKRIEAIQKA
CISSGKLDKKGYGYFNKQQRVNPVMVMMLVVLLAIIFGILSKK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggggttgattgggacgatgcttgagcatccagaggaagcgtacgctctgatgaagctg
aagatcgcggcgtcaaagatcagcaagcaaatcccgccggagcctcactggggattctcg
tacacgatgcttcaaaaagtttctagaagcttcgccctcgttattcagcagcttgaaact
gaactccgcaatgctgtctgcattttttacctggttctcagagcccttgatactgttgag
gacgatactagcatccctgctgaggtcaaagtgccaatcctgcagtcctttcatcgccac
atatatgatcgtgactggcatttttcatgtggtactaaagaatacaaggttctgatggac
aaattccatcatgtttcaactgcatttctagagctgggcaaaagttaccaagaggcaatt
gaggatattacaaagagaatgggtgcaggaatggcaaaatttatttgcaaggaggttgaa
acagttgatgattatgatgaatattgtcactatgtagcaggccttgttggcttagggttg
tctaagctatttcatgcttctggtaaggaagacctagcttcagattctctttccaactcc
atgggattatttcttcagaaaacaaatattattcgagattatttagaagatattaatgag
attccaaaatcacgtatgttctggcctcgggaaatatggagcaaatatgctaacaaactg
gaggatttcaaatacgaggagaattctgnnnnnnnnnngattacaaatgctttgcttcat
ggtgaagattgtctacagtatatggctggtttgaaggacactgccatcttcagattttgt
gctattcctcagatcatggctattggaacattagccttgtgctataacaacctggaggtc
ttcagaggagttgtgaaaatgcgacgtggactaactgctaaggttattggtcagacaaga
atgatgtccgatgtttatggtgcttttttcgaattctctgcactgttgaagtcgaaggtg
gatgagagtgatccaaacgctgctcttacccataagcgcattgaagctatacagaaggct
tgtatttcttccgggaaactagataaaaagggctatggctattttaacaagcagcaacga
gttaaccctgttatggtcatgatgttggtcgtgctgttggctatcatttttggcattctt
tctaagaaatga
DBGET
integrated database retrieval system
