Asparagus officinalis (garden asparagus): 109833519
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Entry
109833519 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109833519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109833519
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
109833519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
zf-RING_6
U-box
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
109833519
NCBI-ProteinID:
XP_020256813
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All DBs
Position
3:26630685..26636664
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AA seq
369 aa
AA seq
DB search
MRESSGDGGSGTSSSAVSRRRRSEIMRAAEKDDHYAAYVHDACRDAFRHLFGTRVAVAYQ
SEVKLLGQTFYYLLTTGSGQQTLGEEYCDISQVASSYGLPPTPARRVLFIVYQTAIPYLA
ERISSRMTSRSIILADSQFDELHGSNYPGRNPAESSITAESSSTNVRRSPISRFRVRLYG
FWLSAVRKWPSVLPFARELMQLALRANLMFFYFEGLYXXXXGKPLNQRPRYQILGVFLLI
QLCILGVEGLRRSNLSSIASSVHQTSVGSHQSSTGRGLPILNEDGDLIIGSNLSKGSWTS
ESSAASEVSRATSKCTLCLSTRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPITHSS
LVCLYHADF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagcagcggcgatggggggagcgggaccagcagctccgccgtttcccggcgg
cggcgcagcgagataatgagggcggcggagaaagacgatcactacgccgcctacgtccac
gacgcctgccgcgacgcgttccgtcacctcttcggcacgagggtcgccgtcgcttatcaa
agcgaggtaaagctgttaggtcagacattttattatctattaacaacgggctcagggcag
cagacactaggtgaagaatattgtgatatatctcaggttgcaagttcttatggacttcca
ccaaccccagctagacgtgtcctttttattgtataccaaacggccattccttaccttgct
gagagaatcagctcgaggatgacatctcggagcatcatcctagctgattctcagtttgat
gagctacatggcagcaattatcccggaaggaatccagcagaatcatctattactgctgaa
agctcttcaacaaatgtacgtagatcacctatatcaaggttcagagtgagactctacggt
ttttggttgtctgcagttcgaaagtggccttcggtccttccatttgcccgtgagcttatg
cagctggcacttcgagccaaccttatgtttttctattttgaaggtctatattannnnnnn
ntcggaaagccattgaatcaaaggcctagatatcaaattctgggtgtgttcctcttaatc
cagctatgtattcttggtgtggaaggacttcgcagaagtaacttatcttcaattgctagc
tctgttcatcagacatcggttggaagccaccaatcttctacaggaagaggtttgcctatt
ttaaatgaagacggagatcttattattggttctaaccttagcaagggcagttggacctca
gaatcatcagctgcttcagaggtttccagagctacaagcaagtgcaccctctgccttagt
actcgccaacacccgactgctacaccttgtggtcatgtattttgctggaactgcattatg
gaatggtgtaatgagaagcctgaatgccctctctgccgaactcccatcacacattcaagt
ttagtttgtttgtatcatgctgacttctaa
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