Asparagus officinalis (garden asparagus): 109833596
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Entry
109833596 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: exportin-T
KO
K14288
exportin-T
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109833596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109833596
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109833596
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
AsnC_trans_reg_3
Motif
Other DBs
NCBI-GeneID:
109833596
NCBI-ProteinID:
XP_020256925
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All DBs
Position
3:29262383..29284647
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AA seq
965 aa
AA seq
DB search
MDDLEKAILLIYDPSSSPDSSLRSQAIDYINQIKFSTNPSSLLRLCLELLSRSSLIPVHX
YPSLSQSEDLPLLRSSLVSLSSSIALSPPFLKNKLAQTLAFLIRLEYPSLFPSPFVQLMP
NLSTAAPTAVDFFSRLLSALDDDLISQDYPRSEXXXXEEISAACRVKDAMRAQCVPQIVS
FFFDAVNAYRLSDPNLAAAVLETMRKYVAWIDIGLVANDVFLPLLFNLVESGELPDYLRL
AAVGCVLAVVSKRMDPRSKLGLLQTLKPQLSRVFTDAEFMLKIGSLITGYATEALECYKK
LGSNEGMGLVEESLPSVFYVMENSDEADLGNIVGFLSSYVAALKSSPSEKQVLYIGRILE
LIHSQIQYDPSYRRNLDIPDKIGKEEEDQMGEDRKDLFTLLRSVCRVAPDVTKLFIRNLL
ANAPSIDQNVEEVEATLSLLYQLGETISEEEMKSGSGLLAELIPMLLSARFSCHSHRIVA
LVYLETVTRYLKFVHENTQYIPSVLAAFLDERGVRHPNLNVGRRASYLFMRAVKLLKAKL
VPFIETILQNLQDALGRYTCLDWSSKELKSSSSEDGSHTFEAIGLLIGMEDVSPEKQSEY
LAALLNPLCQQVESLLLEAKAQGLEESSAKVVSFQQIIMALNALSKGFSERLVTTNRPAI
GIMFKKTLDILLRVLVTFPNMKPLRNKITSFLHRMVDILGPSVFPYLPVALNQLLMESEP
KDMVEFLVLINQVICKFNISVAAMLEEIFPTIASRLFSTLSSDAFPSDSSCNTEEIRELQ
ELQRTLYTFLHVMATHNLSSIFLVPNSRGYLDAIMQLLLLASCSHKDVVVRKMCVQIFVK
LVKDWCAKYNGEDKVPGFRSFMIEKFASNCCFYSVLDKSFELRDANTLVLLGEIVMAQKV
MYEKFGEDFLVHFVSQTLSTAHCPQDLAEQYYQKFQGSDIKALKSFYQSLIEKLRQQQNG
SLVFR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcgagaaagctatcctcctgatctacgatccttcatcatctccagattca
tctcttcgatctcaagccattgattacattaaccagatcaagttttcaacaaacccttca
tctcttttgcgcctttgcctcgagctcttgagccgatcttcgttaatcccggtccatnnt
tacccttctctctctcaatcggaggacttgccgttgttgagatcatccctggtttctctc
tcgtcgtcgattgccctatcgccgccgtttttgaagaacaagttggcgcaaaccctagct
tttttgatccggttggagtacccttctctgttcccgtcgccatttgttcagttgatgccg
aacctatcgacggcggccccgacggccgtcgatttcttctcgaggctgctatcggcgttg
gatgatgatttgatcagtcaggattatccgagatcggaggnnnnnnnnnnggaggagatt
tcggcggcttgtagggttaaggatgcgatgagagctcagtgtgttcctcagattgtttcc
ttctttttcgatgcggtgaatgcgtatcgattgtctgatcctaatcttgctgctgcggtt
ttagaaacgatgagaaagtacgtggcctggattgatattggcctcgttgctaatgatgtt
tttcttcctttgctgtttaatcttgtagaatcaggggagttgccggattatttgaggtta
gctgctgttggttgtgtcctagcggttgtgtccaagagaatggatcctcgatcgaagctg
ggattgcttcaaacgctgaagccacagctgagcagagtgtttacggatgctgagtttatg
ctgaagattggatctttgatcactgggtatgcaacagaggccttggagtgttataagaag
ttgggttccaatgaggggatggggcttgttgaggagtcattgccttcagttttttatgtt
atggaaaactctgatgaagctgatctagggaatatagttggattcttgtcgagttacgtg
gctgctttgaaatcatctccatcagagaaacaagtgctttatattggtaggatactagaa
ttgattcattcccagattcagtatgaccccagttataggaggaaccttgatatcccagat
aaaattggtaaagaagaggaagatcagatgggtgaagataggaaggacctgttcacgctt
ttgcggtcagtttgcagagttgctccggatgtcacaaagctatttatcaggaatttgcta
gctaatgctccttctatagatcagaatgtggaggaagttgaggctactctttctttgtta
tatcagttgggtgagaccatcagcgaagaagagatgaagtctggaagtgggttgttggct
gagttgatcccaatgctattatcagctaggttctcttgccattctcataggattgtggca
cttgtttatttggagacggtcacaagatatttgaagtttgtgcatgagaatacacagtac
atacccagtgtgttggctgcgtttcttgatgagaggggagttcgtcatccaaatctcaat
gtgggtcgacgggctagttatctattcatgagagctgtgaaattattgaaggcaaagctt
gttcctttcatagaaacaattcttcagaacctgcaagatgcactaggtcgctatacatgt
ttggattggtcatcaaaagaattgaagtcctcttcttctgaagacggtagtcacactttt
gaggcaattgggctattgatcggcatggaggatgtttcaccagaaaaacagtcagagtat
ttagcagcattgcttaaccctctgtgtcagcaggtagaatcacttctcctggaagcaaaa
gcacaggggctagaagaatcttcggcaaaagttgtgagcttccaacagattataatggca
ctgaatgctctcagcaagggctttagcgagcggctcgtcacaactaatcgtccagctatt
ggtatcatgtttaagaagactctggatattcttcttcgcgtccttgttacattcccaaat
atgaagcccttgcgtaataagattacttcctttcttcatcggatggttgatattttagga
ccatctgttttcccttatcttcctgtggcattaaaccaattacttatggagagtgagcca
aaagatatggtggagtttctggtgctaatcaatcaagttatatgcaaattcaacatttct
gtggcggctatgctagaagagatatttcctaccatagcaagtagattattcagtactctt
tcaagtgatgcatttccttctgattctagctgtaatactgaggagatacgtgaattacaa
gagttacagcgaacattgtatacctttcttcatgttatggcaacacacaatctctcttca
atttttctagttccaaatagtagaggatatctggatgctataatgcagttgttgctgtta
gcttcttgcagtcacaaagatgttgttgtgaggaagatgtgtgttcagatttttgtcaaa
cttgtgaaagattggtgtgcaaaatataatggtgaagataaggttcctggcttccggagc
tttatgattgagaaatttgcatcaaattgctgcttttacagtgttcttgacaagtcattt
gagctccgtgacgccaatactcttgttcttttgggggaaattgtgatggcacaaaaagtg
atgtatgagaagtttggtgaggattttcttgttcattttgtgtcacaaactctctcaaca
gcgcattgtccacaggatctagcggagcagtactaccaaaaattccagggtagtgatatc
aaggcattaaaatctttctatcaatctcttattgaaaagttgagacagcagcagaatggc
agccttgttttcagatag
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