Asparagus officinalis (garden asparagus): 109833704
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Entry
109833704 CDS
T05243
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109833704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109833704
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109833704
SSDB
Ortholog
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GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
109833704
NCBI-ProteinID:
XP_020257070
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Position
3:complement(33329675..33339723)
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AA seq
487 aa
AA seq
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MANLADSFLADLDELSDNEVNLTDNEDADVAEMEEDGDGDIADIEALNYDDLDSVSKLQK
TQRYIDIMQKVEDALQKGLDVSEADNSSVLEEDPEYQLIVDCNALSVDIENEIIIVHNFI
RDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSG
KPLSEENLKKTIDACDRALALDLAKKQVLDFVESRMGRIAPNVSAIVGTEIAAKLMGTAG
GLSALAKMPACNVQVLGAKKKNLAGFSSATSQIHVGFLEQSEIYQTTPPSLKMRACRLLA
SKSTLAARVDSIRGDPTGKTGRFLLDEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGG
RRLRKKKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVVQSKL
AAKAAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQAHGNALGGGTQSTYFSEVGT
FSKIRRT
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccttgccgattcgttcttggctgatcttgatgaactgtctgacaatgaagtg
aatcttactgacaatgaggatgctgatgtagcagaaatggaagaagatggtgatggtgat
attgcggatattgaggctcttaattatgatgatcttgatagtgtttcgaaattgcagaag
acacaacgctatattgatattatgcagaaagtggaagatgcgctccagaaaggattggat
gtatctgaagctgataattcatcagttttggaggaagatcctgagtatcagcttattgtg
gattgcaatgctttatcagttgatattgagaatgagattattatagtacacaactttata
cgtgacaactatcgcttgaagttccctgagcttgagtctcttgttcatcatcccattgat
tatgcgcgggtggttaaaaaaattggaaacgagatggatctaacacttgttgatttggag
ggtcttctaccctcagctattatcatggttgtatcagttacagcttcaactacaagcggc
aagcctctttcagaagaaaacctgaaaaaaacaattgatgcgtgtgatcgagctcttgct
cttgatttggcaaagaagcaggtacttgattttgttgagagtaggatgggacgtatagcc
ccaaatgtttctgctattgttggcactgaaattgctgcaaaacttatgggaactgctggt
ggtttatcagcactagcaaagatgcccgcttgcaacgttcaggtccttggagcaaagaaa
aagaatcttgctggattttcttctgcaacctctcagattcatgtaggttttcttgaacaa
tctgagatttatcagaccactcctccttctctcaagatgcgtgcttgccgactgctggct
tcaaaatcaaccctagcagcaagagtagattcaataagaggggacccaactggaaaaact
ggcaggtttctgctggacgaaattcgtaagaagattgagaagtggcaggagcctccccct
gcaaagcaaccgaaacctcttccagttcctgattctgagcctaaaaagaagagaggtggt
cgtaggctccggaaaaagaaagaaagatatgcaattactgatatgaggaagctggccaac
cgaatgcaatttggagttccagaagagagttccctaggtgatggtttgggcgaggggtat
ggaatgcttggtcaggcaggaagcggaaagttgcgtgtctcagttgtacaaagtaaactt
gctgctaaagctgctaagaagtttaaggagaagcagtacggaagcagtggtgctacctca
ggactgacatcaagcctagcatttactcctgtacagggaatagaactgtcgaacccccaa
gcccatgggaatgctcttggtggtggaacccagagcacctacttctctgaggttggaaca
ttctcgaagattaggaggacctaa
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