Asparagus officinalis (garden asparagus): 109833757
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Entry
109833757 CDS
T05243
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109833757
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109833757
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
109833757
NCBI-ProteinID:
XP_020257148
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All DBs
Position
3:35048597..35070405
Genome browser
AA seq
1973 aa
AA seq
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MWTNVFRIGELQVVSWFQFLPYESDPNPLPEKSLKSEQKDAATYLVLSAHLQLQNNGFLS
TWTNSFVGPWDPSQGIHNPDEKIKLWLFLPGRHSSIDESAQAAVSKLRVIGTGLWLAPGD
SEEVAVALSQALRNSLERSLRGLSYVRFGDVFTKCHSFASNTQNFRRVQPTIEFIFSVNE
EAIYVHAIISAKHVRGLCSDDMERVSKHRSSNSTGEGLPVIVAPNGMRGRLTGCCPSDLV
KHVYISKNKASKGLIGGMPFDVAQSSGCQLRGQSCFVEITLGCSSKCSSKTLESGVNQNK
NTIHHGEVQMKPVGRSQQKQGSEDQLAILQRTFIYQPETVLVPLMHKAFARTSLKRFCRK
NWSQKSLTELWPLWGFSYSSHIEHCLAFGSTCNDVIDGLEVDNMRLQRRLNSNSNSSSIS
SVSSTSSESDNVMAIDGDDLEADADSHGSKRAALLSNEQLENDGSRMVKRPRTGTDALGQ
TAGVLVQDANNSASAGLINFESQWDWDDDDDEKGFGLDIQIILSEFGDFGDFFENDVLSF
GEPPGTAESQVLMLPAPDCEDVSASPCTGGMDVDQKLSPVALTSFEGVHLPRLALTENTQ
SKNTESTRDSRSLAENHFLPPSMGKFDYLTKAEAMMSFAPEYAAVETPVSEFSTSIFKSP
YLPRSKRVESLQSSTSAYVYGITPSSSCVETSEEKLETTGKVGSAGHDTNSSARSSKLYD
LVQVGRKKNDSKSTNNDISLLKGDASSLSGINSSTTTFTLQRKNEQTFEAGHLLLPVKTV
LATEIECIMFQAAMCRIRHTLLSLNNHLPFGLSNVAGNVMPESCITRTPSDMVPNKYDMK
KKDSLPVRIAGEFDGGIFEEPLTAQVGVWRSVGVPKVTKSSNMRISENSSSLAGNMLTDD
GLSFSGQRQPLQELLDAMVLLVQQSTSFVDISLDMDDSESSYYLLALQEQGRRGFSCGPS
MVHAGCGGLLATCHYMDIAGIDLIDPLSADVPPSSVISLLQSDIKVAMKSAFGNPDGPLT
VFDWCKGRSQSIDSGASGDGYSYVSETKDSSGNLTIVGDSISPQSIGGSSCIREGPRMDE
SSQRRLSQEMGNSESEQQKGYSCGRPTVAVLPLPSILVGYQDDWLKTSPNCLEFWEKGLE
PYALQKSVTYCAVCPDINLLTSAAADFFQQLGTVYEACRLGTHSPLVNGSQMELSPGKGP
SSGLVLVDCPQQVKVAGNNLFSISSISDYFLALSKSWSVDKFISALGKVIRDLKLTTSSS
QNQKEGSAGPCTVVYVVCPFPDSTAVLRTLIESSAAIGSVVLSPDRERQSWLLSQVARAQ
SCPAAADEVTSNVVMLSGFSIPKLVLQIVTVDCLLRVNRPVSELTVLKDIAFTVYNKARR
VSRPIPSNDMFRTLSASGRQQASLMHAASPIQGMWKDCLAPRMSGSSLSREGELDAALRP
GAWDNSWQASRTGLDSNRSADLHFQDETRCMFEPLFILAEPGSLERGSSVSVLGSASLES
SSSKSGIDDSSGIYMQNSNSGRNSEVGTNSLLDIADHDQKLASLHCCYGWTEDWRWLACI
WTDSRGELLDCNIFPFGGISSCQDTKVLQSLFVQVLHQGCQILSSSPDSGSVKARDIIIT
RIGGFFELECQEWQNAIYSVGGNDVKKWPLQLRRSTLNILSSSTNGTSLQQHEMGLIQER
NLPPSPSSSLYSPRAKTSYMKSGLGQGNTKKQLLAGQTGADNSRGLLQLVQSISLVGVSI
DHSLYLMLPADSSSSGTGTQNSSSGSTFSGYVEGFSPVKSVGSMPASYIVIPSPNMRSLS
PTPLQLPTCLTSESPPLAHLLHSKGSAIPLSTGYIVSKAVPTMRKDPAEPVKDDWPSVLS
VTLIDHYGGNNSSSSSNSSIQDKVGRGGSKQGRGVSIGPEAISNRDYELETHLVLQSVAA
ELQALSWMTVSPVYLERRSALPFHCDMILRLRRLLHYADKELSRPPDRAQGVS
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaatgtcttcagaatcggagaactccaagttgtttcatggtttcaatttctc
ccttatgaatctgatccaaaccctcttccagagaaaagtttgaaatccgaacagaaagat
gctgctacttatttggtgctttcagcacatctgcagttgcagaacaatggatttctcagc
acgtggaccaactcttttgttggtccatgggatccatctcagggcatacacaaccctgat
gagaaaattaagctttggctttttcttcctggacggcactcttcaatagatgagtctgct
caagctgcagtatcaaaattgagagttattggtactggactctggttagcccctggagac
tccgaggaggttgctgttgctttatctcaggcattgagaaattcattggaaagatcatta
agaggactatcctatgtgagatttggggacgttttcaccaaatgccactcatttgcatca
aacacacaaaacttcaggagagtgcaaccgacgattgagtttatcttttctgtgaatgaa
gaagcaatctacgtgcatgcaataatatctgcaaagcatgttcggggactttgcagcgat
gacatggaaagggtatcaaagcatcgttcctctaattccactggggaaggtcttccagtc
attgttgcccctaatggcatgcgaggaagacttacaggatgttgtccaagtgacctggtg
aagcatgtgtatatcagcaagaacaaggcttcaaaagggttaattgggggaatgcctttt
gatgtcgctcaatcttcaggctgccagctaagaggtcagagttgctttgttgaaattact
ctgggttgctcctctaaatgcagtagcaaaactttggagtcaggcgttaaccaaaataag
aacaccatccatcatggagaggtacaaatgaagcctgttggaagaagtcagcagaagcag
ggatcagaagatcaacttgcaattcttcaaagaacattcatttaccaaccagaaactgtg
ctggttcctttaatgcacaaggcgtttgctagaacttccctcaagaggttttgtcggaaa
aattggtcccaaaaatcattaactgagctgtggccattatggggtttttcgtattcatca
catattgaacattgcttggcatttggaagcacttgcaatgatgttattgatggacttgaa
gttgataatatgcgactgcagcgccgacttaatagcaacagcaacagtagtagtatcagc
agtgtaagtagcacttcaagtgaatctgataatgtgatggctattgatggtgatgatctt
gaagcagatgctgattctcatggctctaaaagggctgctttattgtccaatgaacaactc
gagaatgatggcagtagaatggttaagcgtcctcggacaggcacagatgcacttggtcag
actgcaggcgtacttgtgcaggatgcaaataattcagcttctgcaggactgataaatttt
gaatctcaatgggattgggacgatgatgatgacgagaaaggctttggcttggatatccaa
ataatactttccgaatttggagattttggtgatttctttgaaaatgatgttctatcattt
ggtgagcctcctggaacagctgaatctcaagtcctcatgttgcctgcccctgattgtgaa
gatgtcagtgcaagtccttgcactggaggaatggatgttgatcagaaactttcgcctgtt
gctctgacttcttttgagggagttcatcttccacgtttggcgcttacggaaaatactcaa
agcaaaaatacagaatctacaagggattcaagatcacttgcagaaaaccatttcttgcca
ccctctatgggtaagtttgattatctcacaaaggctgaagcgatgatgtcatttgcacct
gaatatgcagccgttgagactcctgttagtgagttttcaacatcaatttttaaaagtcca
tacttaccccgatctaaaagggtcgaaagtctgcagtcaagcacaagtgcttatgtgtac
ggcattacaccatcttcttcttgtgtggagacatcagaggaaaaactggaaacaacaggc
aaagtgggttctgcaggacatgatacaaattcctctgcaagatcatcgaaattatatgat
cttgttcaagtcgggagaaaaaagaacgacagtaaatcaaccaacaatgacatatcttta
cttaaaggagatgcatcttctctgtctggcatcaattcgtcaaccacgaccttcactctt
caaaggaagaacgaacaaacatttgaggcgggacatcttttactgcccgtaaagactgta
cttgctacagaaattgaatgcatcatgtttcaagctgccatgtgtcggataagacacaca
ttactttcactgaacaatcatttaccttttggattgagtaatgtagctggaaatgttatg
ccagaatcctgtattactcggacaccttctgatatggtgcctaataagtatgatatgaag
aagaaagattctttacctgtcagaatagctggtgaatttgacggaggaatttttgaagaa
cctctcaccgcacaggtgggtgtttggcgctctgttggggttcctaaagtaacaaagtct
tcaaatatgcgaatttcagaaaattcatcttcattggctggtaatatgctgactgatgat
ggtttaagtttctctgggcaaagacaacctcttcaggagcttctggatgcgatggtcttg
ctagttcaacaatctacttcctttgtggatatttcactggatatggatgacagtgagagt
tcctactatttgcttgcgttacaggaacaaggaaggcgtgggttttcttgtggtccttct
atggttcatgcaggttgtggtggacttttggccacatgtcactatatggacattgctggt
attgacttgatagatccgctctctgctgatgttccaccatcatctgttattagtttgctg
cagtcagacattaaggttgccatgaaatctgctttcggaaatccagatggcccgttaaca
gtgtttgattggtgtaaaggacgaagccaatcgatcgactcaggagcttctggagatgga
tattcttatgttagtgaaactaaggactcctctggtaatcttactattgttggagattca
ataagtcctcaatcaattggtggttcatcttgtattagagaggggccgagaatggatgaa
tcatctcaaagacgattaagccaagagatgggcaattcagagtcagaacagcaaaagggc
tattcttgtggtaggccaacagttgcggtgttgccattgccttctatacttgttgggtac
caggatgattggctgaagacatctcctaactgtcttgaattctgggaaaaaggtctagaa
ccttatgctttgcagaagtcagttacttactgtgctgtttgtccggatattaatctgctt
acttcagctgctgctgatttttttcaacagttaggaacggtttatgaggcctgcagacta
ggaactcattcacctttggtcaatggaagccagatggaactatcccctggaaagggtcca
tcttctggcctagttcttgttgactgtccccagcaagtgaaggttgcaggaaataatcta
ttttctatcagttcaataagtgactactttctggcgttatccaaaagttggagtgtggat
aaattcattagtgctcttggaaaggttatcagggatctaaaactcactacaagttcttcc
cagaatcagaaggaggggagtgcaggtccatgcactgtagtatatgttgtatgccctttc
cctgattctacagctgttctgagaactctgatcgagtcctctgctgccataggatcagtt
gtcctgtctccagatagagagagacaatcctggttactctctcaagttgcgagagctcaa
agttgtccggctgctgccgatgaagtaacatcaaatgttgtaatgctctcaggattcagc
attccaaaacttgttttgcagattgtgactgtcgattgcttactaagagtcaataggcca
gtgagtgagcttacggtcttgaaagatattgctttcactgtgtacaacaaggctcgtcga
gtatcacggcctattcctagcaatgacatgtttcggacattatctgcgtcagggagacaa
caagcttcattgatgcatgcggcttctccaattcaaggcatgtggaaggattgccttgct
cctcgaatgtctggatcctctctttctagagaaggtgagcttgatgctgccttgaggcct
ggtgcttgggataactcatggcaggcatcaaggacaggacttgattcaaatagatcagcg
gatttgcattttcaagatgagacaagatgcatgtttgaaccactatttatactggcagaa
cctggttctttggagcgtggctcgtctgtgagcgtgttaggaagtgcatcactagaatct
tctagttcaaaatctggtattgatgatagtagtggaatttatatgcaaaattccaattca
ggaaggaattcagaggttggaacaaattcattgctcgacatagcagaccatgatcaaaaa
ttagccagccttcactgttgttatgggtggactgaggactggcggtggcttgcctgcata
tggacagactctagaggagagttgcttgattgtaatatatttccatttggtggtattagt
agctgccaagatacaaaggttctccaaagcctgtttgttcaagttttacaccaaggttgt
caaatattatccagttctcctgattctggctctgttaaggcaagggacataattattaca
cgtattggaggtttctttgagttagaatgccaagaatggcagaacgctatatattcagtt
ggaggaaatgatgttaagaagtggcccctgcaactaaggcgatctaccctcaacattctc
tcctcgagtactaatggaacttctcttcagcaacatgaaatgggtttaatacaagaaaga
aatcttcctccctcacctagctcttctttatacagccctcgtgcaaaaacaagctatatg
aaaagtggtctaggccagggtaataccaaaaaacaactactggcaggacagactggggct
gacaattcaagaggacttctacagttggttcagagcatcagtttagttggagtttctatt
gatcattctttgtacctaatgcttccagctgattcttcttcctctggcactggaactcaa
aacagtagcagtggttcaactttctctggatatgtcgaaggcttcagccctgtgaagtct
gtaggatcaatgccagcctcatatatcgtaatcccttcaccaaatatgcgctctctatct
ccaacacccttgcaacttcccacttgcctcacctctgaatctccaccccttgcacatctt
ttacacagcaaaggctctgcaattcctctctcaacaggatacatcgtgtcaaaagcagtc
cctaccatgagaaaagatcctgctgagccagtgaaagatgattggccttctgttctttct
gtcaccctcattgatcactatgggggtaacaacagtagcagtagcagtaacagtagtata
caagacaaagttggtcgaggtggcagtaaacaaggaaggggtgttagtatagggcctgag
gccataagcaatagagattatgaattggagactcatttggttttgcagtcagtggctgct
gagcttcaagctctttcatggatgacagtaagtccagtgtatttggagagacgaagtgct
ttgccttttcattgtgatatgattctaagacttcgaagacttctgcattatgcggataaa
gagttgtcgagacctccagatagagcacaaggggtctcctga
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integrated database retrieval system
