KEGG   Asparagus officinalis (garden asparagus): 109834059
Entry
109834059         CDS       T05243                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109834059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aof03032]
    109834059
   03400 DNA repair and recombination proteins [BR:aof03400]
    109834059
DNA replication proteins [BR:aof03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109834059
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     109834059
SSDB
Motif
Pfam: XPG_I XPG_N XPG_I_2 MIT 5_3_exonuc TPR_1 HHH_5
Other DBs
NCBI-GeneID: 109834059
NCBI-ProteinID: XP_020257540
LinkDB
Position
3:complement(49028574..49057721)
AA seq 695 aa
MHRVNLLRHHGIKPVLVFDGGLLPTKIDQETKRSRARKENLERAVEHEAAGNSAAAFVCY
QKAVDISPSIALGLIKVLKQEKVDYIVAPYEADAQMTFLCMNKLVDAVITEDSDLIPFGC
SRIIFKMDKFGQGVQYQSSMLGRNKELDFTGFTKQMLLEMCILSGCDYLQSLPGMGLKRA
YSLVQKFKSYEKVIKHLRYSAFSVPPHYEENFKKAMWAFLHQRVYDPREEAIVHLSDIPP
DIGEDLDFLGPWLPPDVVKGIAEGDLDPFTKLPFQVEATRKEVVLDKPHSVKDSVFAAGK
KRLDLPVQNNVLTNYFCLASLEAKRKFIAPKVMPKCKETKKSSPQDSINHDSDSPGSAEE
GTHMIDHQQSSLHSKDLGDDLSSKDSLIFHQKQFRTPKVMPKCMVTIESSCPSSNSHDSL
SPGSTTVATPTINSQLSSPLLSRDLGNDLLVKYLMKGLPAEGSNNSTGLLSQESNNESLS
PNLTSHKEQGWNITLYETGQVSSRLADDKRPMETLDRKVIKRSPYFLNNSLDKNDTDYQK
EEPFRIKQTDKGSGHHTVTVASSIQNDYQKSAAKRRKLLHGHNVPSESQPERNLHITSVE
KADSIPNLNNKCKDGKVGGSFGCDVSHIKKYSGIAEKSMEKFASLISSFRYTSSGSRASG
LRAPLKDVQNTCPVRSTVGPIDFSKYAYKPKNKSV
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgcatcgggtaaacttgttgagacaccatggcataaaacctgttcttgtatttgatggg
gggcttttaccaacgaagattgaccaagagaccaagcgctccagggcaagaaaggaaaat
ctcgagcgtgcagtggaacatgaggcagctggcaattctgctgctgcttttgtgtgctac
caaaaagctgttgacatatcaccttcaattgccttagggctaataaaggtgttgaagcag
gagaaagttgattatattgttgcgccctatgaggctgatgcacaaatgacatttttgtgc
atgaacaagcttgttgacgctgtcattactgaggactcagacttgataccttttggctgt
tccaggattattttcaaaatggacaagtttggacagggtgttcagtaccaaagttcaatg
ttaggacggaataaagaacttgattttactggtttcacgaaacaaatgttactagagatg
tgcattttgagtggttgtgactacctgcagtcattaccaggaatgggcttgaaacgagct
tattcacttgttcaaaagtttaaaagctatgaaaaggtaatcaaacacttgcggtacagt
gctttctctgtcccacctcattatgaagaaaattttaagaaagcgatgtgggcgtttctg
catcaaagggtttatgatcctagagaagaagcaatagttcatttatctgatattcctcct
gacattggcgaggacttggattttttgggcccatggctaccaccagatgtagttaaaggc
atagctgaaggtgatcttgatccattcacaaagctgccgttccaggtagaggcaacacgc
aaagaggtggttcttgacaaacctcattcagtaaaagattcagtgttcgcggctggaaag
aaaagactagatttgccagtgcaaaataatgttctaactaattacttctgcttggcatcc
ctagaagcaaaacggaaattcatagccccgaaggttatgccaaaatgtaaggagacgaag
aaatcatctcctcaggactccataaatcatgattcagattcgcctggttcagctgaagag
ggcactcatatgatagaccatcaacaaagttccttgcattcaaaagatttgggtgatgac
ctttcgtcaaaggattctttgatcttccatcaaaaacagttcagaaccccaaaagtcatg
cctaagtgtatggtgacaattgaatcatcatgccccagttctaacagtcatgactccctt
tcacctggttcaaccacagtggctactcctaccataaacagtcaactatcttctccgctt
ctttcaagagatctaggcaatgatcttctggtaaaatatttgatgaaaggtctgcctgcc
gaaggaagcaataattccacaggacttctgtcacaagaatccaataatgaatccttaagt
ccaaatttaacttcgcataaggaacaagggtggaacattacgttgtatgaaactggacaa
gtaagctctagactggctgacgataaaagacctatggaaacattggacagaaaagttatc
aaaagaagtccatatttcctgaacaattcactggacaagaatgatactgattatcaaaaa
gaagaaccctttcgaatcaaacaaacagataagggtagtggtcaccatactgtaactgta
gcctcctcgattcagaatgattatcaaaaaagtgctgcgaagagaagaaagcttctccat
ggccataatgttcccagtgaatctcaaccagagaggaatttgcatattacttcagttgaa
aaagctgatagcattcccaacttaaataacaagtgcaaagatgggaaggttggaggaagt
tttggctgtgatgtttctcatattaagaaatattccggtatagcagaaaaatccatggaa
aagtttgcttcacttatatcgtccttcagatacacctcatccggttctcgtgccagtggt
cttcgagcacctttaaaagatgtacagaacacttgcccagttagatcaactgttgggcca
attgattttagcaaatatgcatataaacccaagaataagtctgtttga

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