KEGG   Asparagus officinalis (garden asparagus): 109834208
Entry
109834208         CDS       T05243                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aof04812]
    109834208
Cytoskeleton proteins [BR:aof04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     109834208
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT140_1st eIF2A Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 109834208
NCBI-ProteinID: XP_020257760
LinkDB
Position
3:59803327..59846233
AA seq 907 aa
MATRGYKLQEFVAHGSDVTCLSIGKKSCRVFITGGEDCKVNLWAVGNPMSILSLPGQTGS
VRSLTFDSAEVLVLAASSNGTIKLWDLEEAKLIRSITGHKSNCSAVEFHPFGEFFASGSS
DTDLKIWDIRKKGCIHTYKGHTRGIRTIRFTPDGRWVVTGGDDHVVKLWDLTAGKLLHDF
KFHNGTIRCMDFHPQEFLLATGSADRTVNFWDLETFELIGSAGPEATGVRSMVFHPDGKT
LFCGLDEALKVFSWEPIRSHDFVDMGWSTLGDLSIYEGKLLGCSYHQSRIGVWVADISLI
GPYADGIIPKNNGLIDPVNIYEKDHPIKLESCTNSSMILVPGPPDHGGKTKETIKCSLNL
SNVYSQGVLEKEPVKIYEKDHPIKLESCTNSSMIVVPGPPDCGGKTNDTMKGSLNLSNVC
SQGVSEKEAICSTKATHLPSTGFGRNNVSMSCHNTPQKFNSKISSKVPTLNSTAFSISKT
TEVPPVTPNKMESSLASREKRLVSSASRVNSRRSLKKGTVVELDVVSNTKATGTSVSLPV
FVPRDHQDSESVDCSRKVTNATEVKVHSTTSGKVHLMRQPSFCGDRSDGQHFMTRSRPSS
SSSTGSGSVDSSSVLRFVVNGGTLSPDNSNSTGIGNVAKKFERITSPEQPVQLHKKKDAE
PPCSSCETSSVKYVRGVPVQLGRTRSLVETWEKGERRDSSHTAAVNSCSEQIKTLENAPP
ESTGETPMTTKEIKAYGDFSCEDVLQGHDVFINNVKSRLTKLQVVRHFWECNGIKSAIDA
VVKLPDYSVQVDVISVLLEKVDLFTLDIFSCLLPLLLGLLNSKADRHVTVSLELLFELVK
RFGQIIQSTISASSSVGVDLQAEQRLERCKQCYTYLLKIKQILSLLIRNGGLVAKPAQKL
YVALSDL
NT seq 2724 nt   +upstreamnt  +downstreamnt
atggcaacgaggggctacaaactgcaggaatttgttgcacatggatctgatgtgacctgt
ttaagcattggcaagaagtcatgcagagtctttattactggtggtgaagattgcaaggtg
aatctttgggcagttggcaatccgatgtcaatactgagcctgcctggccagacgggttca
gtccgatcgctgacttttgattcagcagaggtcttagtgcttgcagcatcttctaatggt
acaatcaagctctgggatctcgaagaggcaaagctcatccggtcaatcacagggcacaaa
tccaattgctcagctgttgaattccatccatttggtgaattctttgcatctggctcttct
gatactgatcttaagatctgggatattagaaagaagggatgtattcatacttacaagggg
cacacacggggcatcagaacaattagatttaccccagatgggcgatgggtagttactggt
ggagatgatcatgtggtgaagttatgggatttgacagctgggaagctcctgcatgacttt
aagttccataatggaacaatccggtgcatggattttcatccacaagagtttcttcttgca
acagggtcagcagatcgaactgtaaatttctgggacttggaaacatttgaacttattggt
tcagctggacctgaggctacaggtgtgcgttccatggtctttcaccctgatggaaaaact
ttattctgtgggttagatgaagcattaaaggttttctcctgggaacccataagatctcat
gattttgttgatatgggctggtccacgttgggggatctcagtatatatgaaggaaaactt
ttgggttgctcctatcatcaaagtcgaattggagtgtgggtcgctgatatatcgcttatt
ggaccatatgcagatggcatcatacccaagaataatgggcttatagatcctgtaaatatt
tatgagaaagatcatcctattaaacttgaaagctgtacaaattctagtatgatattggtt
ccaggacctcctgatcatggaggcaaaactaaagagacaataaaatgttcattgaactta
tctaatgtctacagccaaggagttctggaaaaggagcctgtaaagatttatgagaaagat
catcctattaaactagaaagctgtacaaattctagtatgatagtggttccaggacctcct
gattgtggagggaaaactaacgatacaatgaaaggttcattgaacttatctaacgtctgc
agccaaggagtttcggaaaaggaagctatctgttcaacaaaagcaacccacttaccttca
actggatttggaaggaataatgtctctatgagctgtcataatactccacaaaagttcaat
tcaaaaatttcttcaaaagttccgaccctaaattccactgctttcagcatcagtaagact
acagaagttcctcctgttacaccgaacaagatggaatccagtttagcatctagggaaaag
cggttggtttcaagtgcatccagagtaaatagtcgacgatctctaaagaagggcactgtg
gtggagttggatgttgtaagtaataccaaagcaactggtacatctgtttcgttacctgtt
tttgtaccaagagatcaccaagattcagaaagtgttgattgctcaagaaaagttaccaat
gctactgaagtaaaagttcatagtaccacatctggcaaggtacatctcatgcggcagcca
tcattttgtggtgatagaagcgatggtcaacatttcatgactaggtccaggccttctagt
agttcaagcactggctcaggaagcgtggactctagttctgtcctcaggtttgtggtgaac
ggtggaacactaagccctgacaactcgaacagtacagggataggaaatgttgctaagaaa
tttgaaagaattacgtcaccggagcagcctgtacaattgcacaagaaaaaagatgctgag
ccaccatgctccagctgtgaaacgagctcagtaaagtatgttagaggagttcccgttcaa
cttggtagaacacgatctctcgtagagacctgggagaagggagaacgacgtgacagcagt
cacactgctgcagttaattcttgctctgagcaaataaagacacttgaaaacgcaccacct
gaatcgactggagaaactcctatgaccacaaaagagataaaagcatatggggattttagt
tgtgaagatgtactgcaaggtcatgatgtatttataaacaatgtaaagtctcgtctaaca
aagttacaggtggtgcggcatttttgggaatgtaatggcattaaaagtgcaattgatgca
gtggtgaaattacctgactactctgttcaggttgatgtaattagtgttctcctggaaaaa
gtcgacctcttcacacttgatattttctcatgcttgctgcctctgcttttaggcttacta
aacagcaaagctgacaggcatgttactgtctccttggaactgctgtttgagctcgttaaa
agatttggacaaattatacaatcaaccatctcagcttcttcatcagtaggagttgatctt
caggcggagcagagattggagcgttgtaaacaatgttacacgtatttgctaaagataaag
caaattctctccttgcttatcaggaatggtgggttggtggcaaaacctgctcagaaacta
tatgtagctctgagtgatttgtga

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