KEGG   Asparagus officinalis (garden asparagus): 109834360
Entry
109834360         CDS       T05243                                 
Name
(RefSeq) glycine-rich RNA-binding protein 2, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109834360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109834360
   03041 Spliceosome [BR:aof03041]
    109834360
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109834360
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109834360
Spliceosome [BR:aof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109834360
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_RdRP1_2 RBD_DEAH11
Other DBs
NCBI-GeneID: 109834360
NCBI-ProteinID: XP_020257957
LinkDB
Position
3:complement(77600989..77606228)
AA seq 238 aa
MAFANKLGSIFKNAINSSPSIYQAIRCMSSSKLFVGGISYGTDDHGLREAFAKYGEVVES
RVIFDRETGRSRGFGFVTFTSTEEASAAISDMDGKELHGRLVRVNYANDRSSGGFRGGGG
YGGGGYGGGGGGYGGGGYGGGGGYGGGGGYSGGGGXXXXSGYGGGSDGNSGLAGQSGGNY
PSSDSGAPSFGGGPAAFGNDAGSDPYGSSSAGGGFGKEDSFLDDVKDDDDADDYAKRS
NT seq 717 nt   +upstreamnt  +downstreamnt
atggcttttgccaacaaacttggaagtatatttaagaatgctatcaattcctctccgtca
atataccaagcgatacgatgcatgtcatcatcaaaactcttcgttggaggaatctcgtat
ggcacggatgaccatggtctgagagaagcatttgctaaatatggagaagttgttgaatcc
agggttatttttgaccgagaaactggcaggtcaaggggctttggttttgtaacgttcaca
tctactgaagaagcatctgctgccatcagtgacatggatggaaaggaacttcatggccgt
ttggtaagagtgaactatgctaacgatcgtagcagtggtggattccgtggtggtggtgga
tatggcggaggtggatacggtggtgggggcggtggatatggtggcggtggatacggtggt
ggtggtggatatggtggcggtggtggatactctggcggtggtgggannnnnnnnnncagc
ggatatggtggtggcagtgacggaaattccggtctagctggtcaaagtggtggaaactat
cccagcagcgatagcggagctcctagcttcggtggtgggcctgctgcctttggtaatgat
gctggcagtgacccatatggaagcagcagcgcagggggtggctttggcaaagaagacagc
tttcttgatgacgtgaaagatgatgatgatgcagatgactatgccaagagaagctga

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