Asparagus officinalis (garden asparagus): 109834442
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Entry
109834442 CDS
T05243
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109834442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109834442
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109834442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109834442
NCBI-ProteinID:
XP_020258052
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All DBs
Position
3:88049943..88056297
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AA seq
481 aa
AA seq
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MMESDLGKLFIGGISWDTTEDRLREYFQGFGEVVEAVIMKDRTTGRARGFGFIVFADPAA
AERVVMEKHLIDGRMVEAKKAVPRDDQTIINRSSNSSIHGSPGPTRTKKIFVGGLASTVT
DTDFRQYFEQFGAITDVVVMYDHNTQRPRGFGFITYESEDSVDKVLIKNFHELNGKMVEV
KKAVPKELSPGPNIRSPIGGYSYGMNRMNSFLNGYNQGFNPSSIGGYGMRMDGRIGPLTS
GRTGFPSFSPGYGIGMNFETGMSPSYGGSSNFNSSLGYGRALSPYYSGNSNRFSSPIGYS
GGSGSPGSVFSSPARNLWGNGGLNYTTNNASSNSYLASGSGNLGGFGNSGLNWGGSSSPV
SAPVAGTGTGYSSSSIGYGTGENSFSLGASNYGRSSGAGVSANISLSALSNGYEGNYSES
YGSSSIYGDPTWRSASSDLDGSGPFGYGLGNAASDVSAKASAGYVGGYSVTNRQSNGGIA
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcagatcttggcaagctcttcatcggcgggatttcatgggacacgaccgag
gatcgcctccgcgagtacttccagggctttggagaagttgtggaggctgtgatcatgaag
gatcggaccacgggccgtgcccgtggctttggattcatcgtctttgctgatcctgctgct
gctgagagagtggtcatggagaagcatttgatcgatggccggatggtggaagctaagaag
gctgttccgagagatgatcaaactatcatcaacaggagcagcaacagcagcattcatgga
tctcccggtccaacccgcacaaaaaagatctttgtcggaggcctggcttctactgttacc
gatactgacttcaggcagtactttgagcagtttggggctatcaccgatgtagttgtcatg
tacgatcacaacacacagaggccaagaggattcggtttcatcacttacgaatctgaggat
tctgtggacaaagttttaataaaaaacttccatgagcttaatggtaagatggtggaggtt
aagaaagctgtacccaaagagctctcccctggtccaaacattcggtcgcctattggagga
tatagctatggaatgaatagaatgaatagctttctcaatggttataatcagggattcaat
ccaagttcaattggtggttatggaatgaggatggatggtagaattggacctctaactagt
gggcgaaccgggtttccttcctttagtcctggttatggaattggaatgaattttgagact
gggatgagcccgagttatggaggcagctcaaatttcaacagtagccttggttatggacgg
gctttgagcccttattacagtggaaattccaatagattcagcagtcctattggttatagt
gggggtagtggcagccctgggtcagtttttagttcaccggctcgtaatttatggggaaat
ggggggttgaactatactacaaacaatgcaagttctaattcatacttagcctctggaagt
ggcaaccttggaggatttggtaacagtggacttaactggggaggttcctcttctcctgtt
tctgctcctgttgctggaacaggaacaggctattctagctctagcatcggttatggaact
ggagagaatagcttcagtttgggtgccagcaattatggcaggagcagtggagctggagtt
tctgctaatatttctttgagtgcattgagcaatggatatgaaggaaattattcggagtct
tatggaagcagttcgatctatggtgatccaacttggcgctctgcatcgtctgatcttgat
ggatctggcccgtttggttatgggcttggcaatgcagcttctgatgtctcagccaaggca
tcagctggttatgttggaggttatagtgttaccaataggcagtcaaatggaggaattgct
gcctaa
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