KEGG   Asparagus officinalis (garden asparagus): 109834585
Entry
109834585         CDS       T05243                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11-like
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03020  RNA polymerase
aof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109834585
  09124 Replication and repair
   03420 Nucleotide excision repair
    109834585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109834585
   03400 DNA repair and recombination proteins [BR:aof03400]
    109834585
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     109834585
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109834585
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L ArenaCapSnatch
Other DBs
NCBI-GeneID: 109834585
NCBI-ProteinID: XP_020258209
LinkDB
Position
3:complement(9188388..9201241)
AA seq 113 aa
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNILRMQLHRDPNVLFAG
YKLPHPLQYKILVRIHTTSQSSPSQAYRQGIEDLDKELQYLKKAFEEEKITLQ
NT seq 342 nt   +upstreamnt  +downstreamnt
atgaacgcccccgatcgatacgagcgattcgtcgtaccggaaggcacaaagaaggtctcg
tacgagagggacaccaagatcgtcaacgccgcctccttcaccattgaacgagaggatcat
actattggaaacatacttcggatgcagctgcatagggatccgaatgtacttttcgcgggg
tacaagcttcctcatcctctccagtataagatcttagtgaggatccacactacaagccag
tcttcgccatcgcaggcatatagacaggggattgaagatcttgacaaggagctgcagtat
ttgaagaaagcttttgaggaagagaagatcacgttacagtga

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