Asparagus officinalis (garden asparagus): 109835088
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Entry
109835088 CDS
T05243
Name
(RefSeq) protein RNA-directed DNA methylation 3
Organism
aof
Asparagus officinalis (garden asparagus)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
Spt5-NGN
KOW4_SPT5
KOW5_SPT5
KOWx_SPT5
KOW
Motif
Other DBs
NCBI-GeneID:
109835088
NCBI-ProteinID:
XP_020258675
LinkDB
All DBs
Position
3:<49801251..49824629
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AA seq
1734 aa
AA seq
DB search
CRKRRSGVLQFFDDAAEDDGYEEDEENEGQDDLVYDDKDLNLDINKESSKDFKGAGKSPY
LPIFVKEEEVSGDELEELIKDRYGKGSEYVVYDEDPKQDNAAVSVEHLAGDPNIWKVKCM
VGKEQQIVLSLMHKYADLQRLGTKMDIISAFTLEHVKGYVYIEADKACDVVEACKGFFNI
YSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGDLGQVVDYDDMRKKATIKL
VPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHIEIRRDRHSGECFEILDGL
MLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWLSSVYNVRKKIKPSKD
SDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDKEGQEVITVKAEAIKS
QCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSGIFC
TKSDLCEKITPAKDSFGKGNKASSSFSQDPVISSEQEDSSCTFSRNRRRESNQIFSVGQT
LRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQLLSDPNLKRDTAGGGLSGNGE
QTLGASSWDGGSSSWQDLSTSAFSFSANNDQKSGQEQGADPWAGRVSHVAGDQEQSDPWV
SKASITAGADGGSADPWGSKASLAARDDGGSADPWGSKASLPAGDGGSADPWGSKTSLAA
GAEGSSADPWGSKASLAAREGGSADPSGNKASLAAGDGGSADPWGSKQTPGTRDGGSADP
WGTKLTPGAREQEQGVDPWGSSIAGTTTADNNKPRADPWGGKTTHGGSSHSDKTFDSWAK
ASTASGEENSVWNKTEGVGCEKDGDGWNKPSASSSFSGRERGADQWESKVPAAAKDHARG
VDAWGSKASVANKDQGGEDPWASKVTAGVRAEQGQGTDPWVSNVAVATRDKEQKFDTWSS
KAALAPNSVGDQNSSWDKAAGGGSGEDGDSWSKPSCKGTTVAVNNSSSSSWETAAIGTKS
AEKQEGEPSSWDKAKVSSDGQSGWDMAAGSSIKNNTDGWNNPKSSGGDQVSNWKMGGNED
AWKSSKRDTWEKSSEFEGGRGFGSGGNSWNKPVDSDGGQGSGWGKGSGWDDGAGSGQGGD
NGWNRQRDSDGGWGSGRGRGRGRYGGRGNRDEENQDGSSEFGGGRGSGRGRGRGRYGGRG
SRDEDNKEGSGDFGGGWGSGRGRGRGWYGGRSAGDGENQDGSGDLGWGSGRGRGWGRYGG
RGAGDGDNQDRQGDYGGGWESGRGGGRGRYGERGGTGNEDNQDRTGGSWGSGRGRGQWGG
SGTATEENQDKSGEFGGWGSGKSWNQKEQERGAGPWGSSVAGASTDKEQNADPWGSKATP
SESNHSDKAFDSWVKASSTSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISP
DQGEGAATWASGSSRDKTQGADPWGSKASPAAKDKGEADPWGGKLAASARADPGQGADAW
GSKAAAPSRADKEQKADAWGSKAAPGDSSNNQNSPWNKVAGEGSGKDGDGWSKAATYSTK
NGADGWDKPKSFGSNQASNWKKEGNEDAWNSSNKPKVEGQGSEPSSSWEKPKVSTGATWG
SSSKNGTNEWNNGGNEDAWKKPRGSDWGGGDSSREGQGNYWKREVAFDGGRGFNRGRGIL
GRYGGRGNGDYDDNNNHQDRSGSDFGGRGRGWNGDRGGRGGGRGRGRFQSSDWS
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
tgcaggaagaggcgctccggcgtcctccagtttttcgacgacgccgctgaagacgacggt
tatgaagaagatgaggaaaatgagggtcaagacgatctcgtctacgacgacaaggatctc
aacctcgatatcaacaaggaaagcagtaaagattttaaaggtgctgggaaatccccttat
ctccctatatttgtcaaggaagaagaggtgagtggcgatgaattggaggagctaattaaa
gaccgttatggaaaaggctcggagtatgttgtatatgatgaagatcctaaacaagataat
gctgctgtatcagtagagcatttggcaggggatccaaatatttggaaggttaaatgcatg
gttggtaaagaacaacaaattgttctatccttaatgcataaatatgccgacttgcagagg
cttggaacaaaaatggacataatttctgcattcactcttgagcacgtaaagggctatgta
tacattgaagctgataaagcatgtgatgttgttgaggcttgcaaagggtttttcaatata
tattcaaccagaatggggcttgtgcctaatactgagattccgcacttgctttctattcgg
aataaagcctgtatactttccaaaggtacatgggttcgtatgaagagtgggaactacaaa
ggtgaccttggacaggtcgtggattatgatgacatgcggaagaaagcaacaattaagctg
gttccacgaatcgatctacaagctattgccaaaaaatttggtggtggtgtatctttgaag
gaagctgctgttccttctccacggttgataagctctcacgagttagagcaattcaggtct
catatagagatcaggcgtgaccgccacagtggtgaatgttttgagatacttgatggttta
atgctgaaggacggctacttgtacaagaaggtatccattgcatctattgtctactggggg
gtagaaccttcaaaggatgaacttttgaagttcacggagatgagcaagcctgaggaggaa
gatgtaagctggctttctagcgtttataatgtgcgtaaaaagataaaaccatccaaggat
tcggacctaaaaggatcttctgagaaagggaacagttttaatctccatgacctggtgtta
tttggacgtaaagcatttggtgtcataatagacatggggaaagatggcacgatgaaggta
ttgaggggtgacaaagaaggacaagaagtcatcacagttaaggccgaggccataaaaagt
caatgtgttgataagatgttcacagcttctgatcgccacagaaagaccatttgcataaat
gacattattaaggtgttggagggcccattggagggtagacaaggaactgcttgtcatatg
tacaaaggaactctttttatctatgatgagagccaagagggaaatagtggaatattttgt
actaagtcagacttatgcgagaagattacaccagcaaaggattcatttgggaagggaaat
aaggcaagctcttcattcagccaagatccagtaatatcctctgagcaagaagatagttca
tgtacttttagcaggaatcgccgtagggagtcaaaccagatattctccgtcgggcagacc
ttgagaattcgaaaaggacctttgaagggttatctttgtcgtgttgtccgaatttaccgt
tcagatgttacagtcaagttggattctctggtgaaggtcattacagttgacgagcagttg
ctttctgatcctaacttaaagagggacactgcaggaggtggattatctggaaatggagaa
cagactctgggtgcaagttcatgggatggtggcagtagctcttggcaagatttgtcaact
tccgcgttttctttttctgctaataatgaccaaaaatcagggcaagaacaaggagctgat
ccatgggctggcagggtgtcacatgtggctggagaccaagaacaaagtgatccttgggtt
agtaaagcatcaatcacagctggagcagatgggggaagtgctgatccttggggtagtaaa
gcatcactcgcagccagagatgatgggggaagtgctgatccttggggcagtaaagcatca
cttccagccggagatgggggaagtgctgatccttggggtagtaaaacatcacttgcagcc
ggagcagaagggagcagtgctgatccttggggtagtaaagcatcactagcagccagagag
gggggaagtgctgatccttcgggtaataaagcatcactcgcagccggagatgggggaagt
gctgatccatggggtagcaagcagacaccaggcactcgagatggggggagtgctgatcca
tggggtaccaagctgacaccaggagctagagaacaagaacaaggtgttgatccatggggt
agcagcattgcgggaacaacaacagctgataataataagccaagagctgacccatgggga
gggaaaaccacacacggaggttctagccattctgataaaacctttgatagctgggcaaaa
gcttccactgcaagtggagaggagaattctgtatggaataagacagaaggtgtaggttgt
gaaaaagatggagatggttggaataaaccttcagcaagcagctcattttcgggcagagaa
agaggtgctgatcaatgggagagcaaggttccagctgcagcaaaagatcatgcgcgagga
gttgatgcttggggcagcaaagcctcagttgcaaataaagatcaaggaggtgaggatcca
tgggctagcaaggtaacagctggggttagagctgaacaaggacaaggcactgatccatgg
gttagcaatgtggctgtggcaactagagataaagagcaaaagtttgatacttggagcagc
aaggcggcactggctccaaattcggttggagatcagaattcttcatgggataaggcagca
ggtggaggttcaggagaagatggagatagttggagcaaaccttcttgtaaaggcaccact
gtagctgtaaataacagttcatcttcaagctgggaaactgctgctattggtaccaagtca
gctgagaaacaagaaggtgaaccaagcagctgggataaagcgaaagtttcaagtgatggt
cagtctggatgggatatggcagcaggttcctctatcaaaaataatacagatggatggaac
aatccaaaatcttctggtggcgatcaggtgtcaaactggaagatgggaggcaatgaagat
gcttggaaatctagtaagagggatacttgggaaaaatcaagtgaatttgaaggtggccgt
ggatttggaagtggtggaaattcatggaacaaaccagttgatagtgacggaggtcaagga
tctggctggggaaaaggatctggatgggacgatggagctggtagcggtcaaggtggagac
aatggttggaacaggcaaagagattctgatgggggttggggatctggtaggggaagggga
agaggtcgatatgggggaagaggaaacagagacgaagaaaatcaggatggttcaagtgag
tttggtggaggtaggggatctgggagaggaagaggtaggggtcgatatgggggaagagga
agcagagacgaagataataaggagggttcaggtgattttggtgggggttgggggtctggg
aggggaagaggaaggggttggtatggagggagaagtgctggagatggagaaaatcaggat
ggatcaggtgacttgggttggggatctgggaggggaagaggatggggtcgatatggaggg
agaggtgctggagatggagataatcaggacaggcaaggcgactatggtgggggctgggag
tctggaaggggaggaggaaggggtcgatatggggaaagaggaggaactggcaatgaagat
aatcaggacaggacaggtggttcttggggaagtggaagaggaaggggtcaatggggagga
agtgggactgcaactgaagaaaatcaggacaagtcaggtgagtttgggggctggggatct
ggaaagagttggaatcagaaagaacaagaaagaggtgctggtccatggggttctagcgtg
gcaggagcatctacagataaagagcagaatgctgatccatggggtagtaaggcgacacca
agtgaatctaaccattctgataaagcctttgacagctgggtgaaggcttctagcacaagt
ggagagaggaattctttatgggctaaaacaacaggtggaggaggttccggaaaagatgga
gatggttggaataaatcttccactaaaaccatttcatcgacattgggtatgatatcacca
gatcaaggagaaggagctgctacttgggcttcaggttcttctagagataaaacacaagga
gctgatccatggggtagcaaggcatcacctgcagctaaagataaaggagaagctgatcca
tggggtggaaaattagctgcttcggctagagcagatccaggacaaggtgctgatgcatgg
ggaagcaaggccgcagcaccatctagagctgataaagagcaaaaagccgatgcatggggt
agcaaggctgcacctggtgattcaagtaacaatcagaattctccgtggaataaggtagca
ggtgaaggttctggaaaagatggagatggttggagtaaagcagctacttactctaccaag
aatggggcagatgggtgggataaaccaaagtcgttcggtagcaatcaggcatcaaattgg
aaaaaagaaggcaatgaggatgcttggaactcatcgaacaaacctaaggttgagggccag
ggaagtgaaccaagtagtagctgggagaaaccgaaagtttcaactggggccacttggggt
tcctctagcaaaaatggaacaaatgaatggaataatggtggcaatgaggatgcttggaaa
aaacctagaggatctgattggggcggtggagatagtagtcgtgaaggccaaggtaattat
tggaagagggaagtagcttttgatgggggcagggggtttaacaggggaagaggaattctg
ggtagatatggaggaagaggaaatggagattatgatgataacaataatcatcaggataga
tcaggtagtgactttggtggaagaggaaggggttggaatggagatagaggtggtcgtggt
ggtggccgaggccgtgggaggtttcagtcttctgattggagctag
DBGET
integrated database retrieval system
