Asparagus officinalis (garden asparagus): 109835558
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Entry
109835558 CDS
T05243
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109835558
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109835558
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
C2H2-2nd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
109835558
NCBI-ProteinID:
XP_020259115
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Position
3:complement(107430073..107433632)
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AA seq
406 aa
AA seq
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MVNWVFISDSLIIASMGNGVVIFGLWVAAILSLVSARNSIYNVADYGAVGNGQRDDTQAF
LKAWGAACADSYYPTFLIPSGKGRTFLLSQITFSGPCKSNVHVQVSGNLVAPNKLWTKKP
ETWIVFINIEGLTVDGHGQIDGQGAIWWPCITKHICSGAPYIMQFLGCTGLKLSGIYLKN
SPGKHLAIYKSDWTTIKGLTITAPGDSPNTDGILIAESNHVHVYSSNIGVGDDCVAIGSG
CYDVNISSVTCGPGHGISIGSLGANSKVEKVRVSGCNIFQTTVGVRIKTWQGGSGYAKNI
LYEHIVFNSVRSPILIDQYYCPQGNCANKTSAVAISDVTYNDLHGTSVDPVAIKIACSES
MKCDRVVLNDVSFSFEGSQAPMQSYCLNAYGKMYGKVVPEVPCLKW
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggtcaattgggtttttatatccgattcattaataattgctagcatggggaatggagta
gtaatttttgggctatgggtggctgcaatattgagtttggtttctgcccgcaattctatc
tacaacgttgccgactatggcgccgttggcaatggtcaaagagatgatacgcaagcattc
ctaaaggcatggggagcggcttgtgcagattcttactatccaactttcctcattccatca
ggaaaaggtagaacattcctcttgagtcagataaccttttctggaccctgcaagtccaac
gtacatgtacaggttagtggaaacttggtagcaccaaacaagttgtggactaagaagcca
gagacatggatagtgttcatcaacatagaagggctcacggtggatggtcacggtcagatt
gatggccaaggtgccatttggtggccttgcatcactaaacatatatgctctggggcacct
tatataatgcagtttttggggtgtacgggcctaaaactgagcggcatctacctcaagaac
agtcctgggaagcatcttgcaatatacaagagtgactggacgacgataaaggggcttact
ataacggcccctggcgatagtccaaacactgacggcatcctcatcgcggagtctaatcat
gtacacgtatattcgtcgaacattggagtgggagatgattgcgttgccataggatcgggc
tgctatgatgttaatataagctccgttacatgtgggcctggtcatggcataagtattgga
agtcttggagccaactctaaggttgaaaaggttcgcgtctccggctgtaatatttttcag
actacagtaggtgtcaggatcaaaacatggcagggtggatctggttatgccaaaaatata
ttgtatgagcacatcgtcttcaattcagtaaggtctccgatattaatcgatcaatactac
tgtccacaaggaaactgcgctaataagacatctgcagtggccataagcgacgtcacatac
aatgatctacacgggacttcagtggatccagtggcgatcaaaatagcgtgtagcgagagc
atgaagtgcgaccgtgtggtactgaacgatgttagttttagttttgagggttcccaagcg
ccgatgcaatcttattgcctcaatgcctacggtaaaatgtatggaaaagttgtccctgaa
gttccttgcctcaagtggtag
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