Asparagus officinalis (garden asparagus): 109835643
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Entry
109835643 CDS
T05243
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109835643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109835643
Membrane trafficking [BR:
aof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109835643
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109835643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
TPR_COPA_B
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_SPT8
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
WD_LRWD1
Clathrin
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
109835643
NCBI-ProteinID:
XP_020259208
LinkDB
All DBs
Position
3:104985880..105000478
Genome browser
AA seq
739 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCIWDYQSQTMAKSFEVTELPV
RSAKFIARKQWIVAGADDMYIRVYNYNTMDKVNVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWICTQIFEGHTHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHFKGVNCVDYFTGGDRPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSTVCFHPE
LPIIITGSEDGTVRIWHAMTYRLENTLNYGLERVWAVGYLKGSRRVVIGYDEGTIMIKLG
REVPVASMDNSGKIIWAKHNEVQTVNIKTVGAEYEVTDGERLPLAVKELGSCDLYPQSLK
HNRNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSRVKIFSKNFQ
ERKSIRPTFSAERIFGGALLAMCTNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLLTI
ASDSSSYILKYNGDIVSSYLESGNTLDEQGVEDAFETLHEIDERVRTGLWVGDCFIYNNS
SGRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLDRANEVLQSIPKEHHNSVAHFLESRGMPEDALEVATDPNYRFDLAVQLERLDIAQA
IALEVQSESKWKQLGKLAMSNGKAPRPAPISFLNWQRVMGHRPGGYSTAEDLPAIRNQKS
TLKPNLISYHHLISLHFLE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctcgaaatcaagaggaaacttgcgcagaggtcggagagggtgaagtcg
gtggatctgcatccaacagaaccatggattctagcgagtctgtattcggggagtgtctgc
atctgggattaccaatcacagactatggcaaagtcatttgaggtcactgaactgcctgta
cggtctgcaaaatttattgcccgaaagcagtggattgtagctggggcagatgatatgtat
attcgtgtttacaattacaatacgatggacaaggttaatgtttttgaggcacacacagat
tatatcaggtgtgtggctgtccatccgacccttccatatgtgttgtcatcatctgatgac
atgctgatcaagctctgggattgggagaagggttggatatgcactcagatttttgaagga
catactcactatgtgatgcaagtcactttcaaccccaaagacacgaatacttttgcaagt
gcttctcttgatcgcacaataaagatctggaatcttggttctcctgatccaaactttaca
ttagatgcacatttcaagggagtaaactgtgtcgattactttactggtggtgataggcca
tatctaatcactggttctgatgatcatacggccaaggtctgggattatcaaaccaaaagc
tgtgtacaaactctggagggccatacacacaatgtttctactgtttgtttccatcccgag
cttcctataataatcacgggttcagaggatgggactgttcgaatatggcatgcaatgaca
tatagacttgagaacacattaaattacggtcttgagcgagtttgggctgtggggtacttg
aaaggttcaaggagagtagtaattggatatgatgaaggaaccataatgattaaacttgga
cgggaagtgccagtagctagtatggacaacagcggtaagatcatatgggcaaagcataac
gaagtccaaactgtcaatatcaagacagttggggcagagtatgaggttacagatggtgaa
agattgcctttggctgttaaggagctggggagctgtgacctctatccacaaagcttaaag
cataatcgcaatggtagatttgtggttgtctgtggagatggtgaatacattatctataca
gcgctggcatggagaaacagatcttttggctctgctctcgagtttgtatggtcatctgac
ggtgaatacgcagtcagggaaagtacatcaagagttaaaattttcagcaaaaacttccag
gagaggaaaagcataagaccgaccttttctgctgaacgcatctttgggggagctttgctt
gcaatgtgcacaaatgacttcatttgcttttatgattgggctgaatgcagattgatacgt
cgtattgatgttaatgtcaaaaatctctattgggctgatagtggtgacctacttacgata
gcgagtgattcctcctcctacattttaaagtataatggagacattgtatcttcttatctt
gaaagtggtaatacgttggatgaacaaggtgttgaggatgcttttgaaacacttcatgaa
atagatgagcgagtgcgaactggactatgggttggggactgtttcatttacaataattct
tcaggaagattgaattactgtgttggtggagaggttaccaccatgttccacttggaccgg
cctatgtacttgttgggatatcttgctagtcagagtagggtgtatctcattgacaaggag
ttcaatgttatggggtacactttattacttagtttgattgaatataaaacactagtgatg
cgtggggatctggatcgtgctaatgaagttttgcagtcaattccaaaggagcatcacaac
agtgtggcccatttcttggaatctcgaggcatgccagaggatgctttggaagtggcaaca
gatcctaattacagattcgatcttgctgtgcagcttgagcggttggacattgcacaggct
atagctttggaggtccaaagcgagtcaaaatggaagcagctaggaaagcttgcaatgtct
aatgggaaggctccaagaccagcccccatctccttcctcaattggcagcgagtgatggga
catcggcctggtggttattcaacggcagaggatttgccggcgatcaggaatcaaaaatca
acactcaaacccaatttaatttcttatcatcatttgatttccttacattttttagaataa
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