Asparagus officinalis (garden asparagus): 109835683
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Entry
109835683 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 17
KO
K15133
mediator of RNA polymerase II transcription subunit 17
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109835683
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Head
109835683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med17
Motif
Other DBs
NCBI-GeneID:
109835683
NCBI-ProteinID:
XP_020259265
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Position
3:107016145..107022454
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AA seq
670 aa
AA seq
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MDSNMKIDLDKLPIKRIEAIEESGVEHFPSEISNEETRLNAIRRVDFSSIIERDSKKAKS
SKESPAAGAGVAVXXXXWPWQSLVENLRQAHQELNVVIDLINTVEANDAVTVAWMQRPKQ
LPNEVLSDLSVSAATKLQWLRHLGRYFKQSSKALDQQVSREARFYGSLIRLQHNWKVKRQ
RLMGTVPGNESFTIDLQDNSILDGPLLSRPSSLSTVRIDEDSTGILAVQRPLKSCHSLCL
GFLGANRKPRSFTRRKVDGSKDHLPEDKKDALTDEDVNQCVKDTHSTLREIHQSIFQEQV
FDMVNRETWNPSPGVNMTGMREDFLRLAIGQETSICLYLVPSGKDDEPQTDTSIGQTQNE
ENGDSRSEQSQLMVIDEKHDSTNVKSSGLPDPVSLEIYLQYLFHETVLIKAREKRSHGLS
QVSGQSAGQGGSLLGHFCLTIAHRIFSKKVLSKLETLVGRVPYLHLLSHPTWSSRTSSWS
VSLKVPQSILHSGRRIKASDNHDAKRGTRSHFHTKVVVNNDQISVSAEGAPSIIGSFRGN
ATNVCSINSYGCDLEDLPMTILQQVASQVILWLHEEASVVGMKASQDFLSLKFNLDQGET
LSLVAHIDPHDVRGCISWWLIVDHGSSEEGQLSAENGGSDYRTFLGYLTLQVLYSTVMDL
VSFCSAGGSY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaacatgaagatcgacctcgacaagctcccgatcaagcgcatcgaagccatc
gaagaatccggcgtcgagcatttcccttcagaaattagcaatgaggagactcggctgaat
gcgattcggagagtcgatttctcgtcgatcatcgagagggattcgaagaaagcgaagagc
tctaaagagtctcctgcggcgggcgccggcgtggccgtggnnnnnnnnnnntggccgtgg
cagagtttggtggagaatctgaggcaggctcatcaggagttgaatgttgttattgatctc
atcaacaccgttgaagcaaatgatgctgtcacagttgcttggatgcagaggccgaagcag
ttgcctaatgaagttttatcggatctctcggtgtctgcggctactaagctgcagtggctg
cggcatctagggaggtattttaaacaatcttctaaagcattagaccagcaggtctcaaga
gaagccagattttatggttcgctgatcagactgcaacataattggaaagtgaaacgacag
cgtttaatggggactgttccaggcaatgagagtttcacaattgatctacaagataattca
atattagatgggccactattgtctaggccatcttctttatcaacagttcgaattgatgaa
gactctacaggcattctggctgtacagcggccactgaagtcatgtcattctctatgtctt
ggatttcttggtgctaatcgaaaaccaaggagctttaccagaaggaaagtagatgggtca
aaagatcatcttccggaagataagaaagatgctttgactgacgaagatgttaatcaatgt
gtgaaagatacacattcaacacttcgtgagattcatcaatctatatttcaagagcaggtt
tttgatatggtgaaccgtgagacgtggaatccctccccaggagttaacatgactgggatg
cgtgaagactttctgcggttggcaattggtcaagagacttctatatgcttgtatcttgtg
ccttctgggaaagatgatgagcctcaaacggacacatctataggtcagacccaaaatgag
gaaaatggggattcacgttctgagcaatcacagctgatggttatagatgagaaacatgat
tcaaccaatgtgaagtcttcagggcttcctgatccagtcagtttggaaatttatttgcaa
tatctttttcatgaaactgttctaataaaagcaagagaaaagcgttctcatggcctgtca
caagtttctggtcagtctgcaggccaaggtggtagtcttttgggtcatttctgcttgaca
atagctcataggattttttcaaagaaagtactttccaagctggaaactctggttggcagg
gttccatatcttcatttactctctcatcctacatggagttctcgaacctcttcatggtca
gtctctttgaaggttcctcaatcaattctccattctggcagacgaattaaagcgtcagat
aatcacgatgcaaagaggggaaccaggtcacattttcatactaaggtggtggtgaataat
gatcaaattagtgtgagtgcagaaggtgcccctagtatcattggttcattccgagggaat
gctaccaatgtttgctcgataaatagttatggttgtgacttggaagatctgccaatgact
atcttgcagcaggttgctagtcaagttatcctttggcttcacgaagaggcttcagtagtc
ggtatgaaagcaagtcaagacttcctaagcctaaaattcaatctggaccaaggcgagacc
ctcagcctagtcgctcacattgacccacacgatgtccgcgggtgcatctcatggtggctc
attgtcgaccacggttcctcagaggaggggcagttatcggcagaaaatggtggatcggat
tacagaacgttcttaggatacttgactcttcaagttctgtattctacagtgatggattta
gtgagcttctgtagtgctggtggaagctactga
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