Asparagus officinalis (garden asparagus): 109836232
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Entry
109836232 CDS
T05243
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109836232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109836232
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109836232
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DeaD_C
ACBP4_C
APG6_N
DUF16
Motif
Other DBs
NCBI-GeneID:
109836232
NCBI-ProteinID:
XP_020259689
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Position
4:2904210..2919472
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AA seq
403 aa
AA seq
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MATSPMVLGSDGDDSDVEGSGLDSSTASSDDGEETDDLLLRRFEIGCFFEGLGNGGLDSR
QRLVLAADEASDDADGSDEDFKDEEDERRGLGILGSKTQDFGGERREAAAPAAAVRRTFN
TTSSPALAPRVFICRSASAPAATTTSSASPLFGTSALISASTSASSSTTSQTLSSTIAAS
SSGTSASISSTTSQSPKFPSEIVGKNVEEIIKDWNSELQERTTKFRKHAVAIAEWDRRIL
RNRDVLLRLEAEVAKVVETQAFLEKQLELIETHQQEVDKALQSMEGEAERVYEDERGLLL
EDEAAFARDSMYEQAEFIESELQKMAEQIKLIIEKVNAKQGGDLSAIDGMTPIDFVVRIL
NNQLSSLMWIDEKANEFSTRIKKLASHGTGSDHDMAGSGFWLK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagtccgatggttctcgggagtgatggcgacgatagtgatgtcgaaggatct
ggtttggacagctcgacggcctccagtgatgacggcgaagagactgacgacctcctcctt
cgaaggttcgagatcgggtgttttttcgagggattagggaacggcggcctcgattctcgg
cagagactggtactggcggctgacgaagcttccgatgatgctgacggctccgatgaagat
tttaaggacgaagaggatgagcggcgtggattggggattttggggagcaagacacaagat
tttgggggagagagaagagaagctgctgcgcctgctgccgctgttcgccgtacattcaac
accactagctcacctgcactcgctcctcgcgttttcatttgcaggtccgcgtctgctccg
gcggccaccaccacttcatcagcttctcctttgtttggcacttctgcattgatttctgca
agcacttcagcctccagctcaactacaagccagacattatcttccacaattgcagctagc
agtagcggaacatcagcttccatcagttcaacaacatcacagtcacctaagtttccatca
gagattgttgggaaaaatgtcgaggagataataaaagactggaattctgagcttcaggaa
cgcactaccaagttccggaaacatgctgttgcaatagctgaatgggacaggaggatcttg
cgcaatagagatgtgcttctcaggcttgaggctgaggtggcgaaagttgtcgagactcaa
gctttcttagagaagcagctagaattgattgaaactcatcagcaagaggttgacaaggct
ttgcaaagcatggaaggagaagcagagcgtgtatatgaggatgaacgtgggttacttctt
gaagatgaggctgcttttgcaagagattcaatgtatgaacaggctgagtttattgagagc
gaattgcaaaagatggctgaacaaattaaattgattatcgaaaaagtaaatgcaaaacag
ggtggtgatctgagtgcaattgatggtatgactcccattgatttcgttgtccggatatta
aataatcaactgagttcactaatgtggatcgatgagaaggccaacgagttctcaacccgt
atcaagaaattggcaagtcacggaaccggatctgatcatgatatggcaggttcaggattt
tggttaaaataa
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