KEGG   Asparagus officinalis (garden asparagus): 109836399
Entry
109836399         CDS       T05243                                 
Name
(RefSeq) uncharacterized protein LOC109836399
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109836399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109836399
Spliceosome [BR:aof03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109836399
 Complex B
    109836399
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11
Other DBs
NCBI-GeneID: 109836399
NCBI-ProteinID: XP_020259876
LinkDB
Position
4:3919896..3933601
AA seq 1150 aa
MSRTSRNSEVTCENCNEGTAARTRPISLEEILSRRKKKLNVDDKGEAIASVEKADSGPGS
DKGLESKKESKDAAKDNSRSLEEAVPKKEREYSESRNEGNGDSGANMNSKSYDSKSSRDK
ESKKEKENRAGFEREYEKKLAKVSTEDDKHKERDKESKKEKENHHKSRTSNHSGADFEKE
YEKKLAKISIEKDKHGERDKESKKEKENHQRIRTSNHSGTDYENEYEKKPAKISMEKDKY
EEIDKESKEERESHHRSRNSNHSGADFEKEYEKKPTKVSIEKAKHEERDKESKKEKENHH
RSRTSNQSGAAVDKEYEKKPAKVSIEKYKPEESDKERKKEKENHHRSRPGNQLGADVEKD
YEKKLAKISLEKDRHEERDSKSGKERKRKHDSHNDDKIRPENDDKERKRKHGGHNDDKLR
PETDDFISKKRDFGKSRGAEYTVRKDQYTEHSERKDQKKEHLERKDQKKEHPRTHHEESR
TKRRRSRSREYDQERDRSRSMSPRVLRSSHRGMDYDEPIFQSSKDKSRRKYSDNDKYRNS
GNDGYGSGHYRKRGSGLGGYSPRKRRTGAAVRTPSPKKLSPKCSPKRSPEKKSSTWDQPP
AGTSHGGSGSIFATLQSPSSKAVELTSSTPFTQTATKTQPVPSTDAASVLINASIDSVQL
TQATRPRRRLYIENLPISASEKSVIDCLNDFVLSSGGSHIQGAKPCISCIINKEKHQAVV
EFLTPEAATAAISFDGRSLSGSILKIRRPKDFVEAATGAPEKTLPTVKAISEVVKDSPHK
IFIGGISNALSSDMFREVVSAFGLLRGYHFEFNEVLDGPCAFLEYEDHSITQKACAGLNG
MKLGGHVLTAIQAFPDYHGSEEDAENLPSYDVPLHAKPLLADPTRVLQLKNVVNPEEFLS
LSDSELEEIVEDIRLECARFGTVKSINVVKFNSRSKDDTQDSERREPLAATDQSRSPTKS
CKNGDLDAAALDRAEGLQDASNINAENETNDDGNPEEDDIEKRNNDDEKPVEYKMKETVN
LGSTDGDTSQLEVPSNLDKDINITEENTAKSEAHTSSEGIEQSPVGTAIPMDTTDLENSA
ADEDEVENGDDSNHQSHNVELLEPGYVLVEFLRKEAACAAAHCLHGRYYGEHIVSAGYFS
HDLYITRFSR
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgagtagaactagtcgcaatagcgaggttacttgcgaaaactgtaatgaaggcactgca
gctcggacaagaccaattagccttgaagagatattgtcaagacggaaaaagaaactgaat
gtggatgataaaggagaagcaatagcttctgttgagaaggctgatagtggtcctggatct
gataagggtcttgagagcaagaaggaatccaaagatgcagcaaaagacaactccaggagc
ttggaagaggcagtccctaagaaagagcgtgaatactctgaaagcagaaatgaagggaac
ggagattcaggagccaatatgaattcgaaatcttatgatagtaagagtagtagagataaa
gaaagcaagaaggaaaaggaaaaccgagctggttttgagagggaatatgaaaagaagctg
gctaaagtttcaacagaggatgataaacataaggaaagagacaaagaaagcaagaaggaa
aaggaaaaccaccataagagcagaactagcaaccactcaggtgctgattttgagaaggaa
tatgaaaagaaactggctaaaatttcaatagagaaagataaacacggggaaagagacaaa
gaaagcaagaaggaaaaggaaaaccaccaaaggatcagaactagcaaccactcaggaact
gattacgagaatgaatatgaaaagaaaccggctaaaatttcaatggagaaagataaatac
gaggaaatagacaaagaaagcaaggaggaaagggaaagccaccataggagcagaaatagc
aaccactcaggagctgattttgagaaggaatatgaaaagaaaccgactaaagtttcaata
gagaaagctaaacacgaggaaagagacaaagaaagcaagaaggaaaaggaaaaccaccat
aggagcagaactagcaaccagtcaggagctgctgttgacaaggaatatgaaaagaaaccg
gctaaagtttcaatagagaaatataagcctgaggaaagtgacaaagaaaggaagaaagaa
aaggaaaaccaccataggagcagacctggcaaccagttgggagctgatgttgagaaggat
tacgaaaagaaactggctaaaatttcattggagaaagatagacatgaggaaagagatagc
aagtctggaaaggaaaggaaaagaaaacatgacagtcacaatgatgataaaattagacca
gagaatgatgataaggaaaggaaaagaaaacacggtggtcacaatgatgataaacttaga
ccagagactgatgatttcatatcaaagaagcgtgattttggcaaatcgcgtggtgcagag
tatacagtaagaaaggatcagtacacagagcattcagaaagaaaggatcagaaaaaagag
cacttggaaagaaaggatcagaaaaaggagcatcctcgaactcatcatgaagagtcgagg
acaaaaagaaggaggtcaagaagccgagaatatgatcaagaaagggataggtcacgttca
atgtcccctagggtgcttagaagctcccaccgtggaatggattatgatgaacctatcttt
cagtcctctaaagacaaatcaagaagaaaatattctgataatgataaatataggaattca
gggaatgatggttatggtagcgggcattatcgcaaacgtggtagtgggcttgggggctac
tctccgaggaagaggagaaccggggcagcagtgagaactccatctccaaagaaactctcc
ccaaaatgctctcctaaacgctctccggagaagaaaagttccacatgggatcagcctcca
gcaggaacaagccatggtggttctggatctatttttgccactcttcaatcaccatctagt
aaggctgttgagttaacatcttctacgccatttacacaaactgcgacaaaaacccagcca
gtaccttcaactgatgctgcatcagttctgataaatgcatccattgattctgttcagttg
acgcaagcaacccgcccaaggaggaggctttatatagaaaatttaccgatatctgcatct
gaaaaatcagtaattgactgtcttaatgatttcgtcctttcatctggtggtagtcacatt
caaggagctaaaccctgcatcagttgtataataaacaaagaaaagcatcaggctgtggtt
gaatttcttacgccggaggctgctacagcagctatttcttttgatggacgatctttgtct
ggatctattctcaaaatcagacgaccaaaagattttgttgaagcagctactggagctccg
gaaaaaacactgccaacggtcaaagcaatatcagaagttgtgaaagattcaccccacaag
atcttcattggtggaatttccaacgctctgtcatctgatatgtttcgggaggttgttagt
gcttttggacttctgagaggataccactttgagttcaatgaggtgctagatgggccatgt
gcctttttagagtatgaagatcattccattactcagaaggcttgtgctgggcttaatgga
atgaagctcggtgggcatgtccttactgcaattcaagcatttcctgattaccatgggtcg
gaggaggatgctgaaaaccttccatcatatgacgttcccttgcatgcaaaaccactgctt
gcagaccccacacgagtgctacaactcaagaatgtggtcaacccggaggaattcctgtca
ctttccgattctgaattagaggaaatagttgaagatataaggttggagtgtgcaaggttt
ggaaccgtaaagtctataaatgtggttaagttcaacagcaggagcaaagatgatactcaa
gattctgaacgacgagagcccctcgctgccacagaccaatcaaggagtcctaccaagagt
tgtaagaatggagatttggatgcagcagctttggatcgtgctgaagggcttcaagatgcc
agtaatattaatgcagagaatgaaactaatgatgatgggaacccagaggaagatgatata
gagaagagaaacaatgacgatgagaaacccgtggagtataagatgaaagaaactgtgaac
ctcggctctacagatggggacacttctcaattggaagttccttctaaccttgataaggat
ataaatataacagaagaaaacactgctaaatctgaagcacatacaagcagcgaagggatc
gagcaaagtccagtcgggactgctattcctatggatactacagatttggaaaattctgct
gctgatgaagacgaggtagagaatggagacgacagtaatcatcagagtcacaatgtggaa
ttacttgaaccaggttatgtattggttgagttcttgaggaaggaagcagcatgtgctgcc
gcacactgtctccatgggcgatattatggcgaacatattgtttcagctggttatttttca
catgatctctacataacaaggttttccaggtga

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