Asparagus officinalis (garden asparagus): 109836461
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Entry
109836461 CDS
T05243
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109836461
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109836461
Factors involved in mRNA localization
Other mRNA localization factors
109836461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
109836461
NCBI-ProteinID:
XP_020259945
LinkDB
All DBs
Position
4:5987472..6034845
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AA seq
1105 aa
AA seq
DB search
MAIPVEEAIAALSTFSLEDEQPDLQGLAVLISTERCATNSPIEYGDVSAYRLSLAEDTKA
INQLNTLIQEGREMASLLYTYRSCVKALPQLPDSMKHSQPDLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLINGPTITHFWSMIKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDTDSMREELDDLQIFLSTRWAILLNLQAEMFRANTVEDILQVLIV
FCVESLELDFALLFQERHALLRVLPVLVVLATSSEKDAESLYRRIKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSMYFPSFSSQTRLLTLPAPHEIPPREMQDYQRQYLIVNHIGAI
RAEHDDFSIRFASSKNQMVILKSTDGADSDWSREVKGNMYDIVVEGFQLLSRWTGRVWEQ
CAWKFSRPCKDPASFDSYESSTTFFDYEKVVRWNYTPDERKALLELVSCIKSVGSMMQRC
DTLVADALWETIHVEVQDFVQDKLDSMLRTTFRKKKDLSRILSDMRTLSADWMANTSKSE
QEFHSLHQENEENKQNMIFPRPVAPTVAQVHCLQFLICELVSGGNLRKPGGLFGNSGSGI
PIEDLKQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPW
MLVDHVIESQDAGLIESILMPFDIYNDSAQHALTVLKQRFLYDEIEAEVDLCFDQLVFKL
SEIIFSYYKRCAASDLLDESFLAACDDADKYSVRPLRFNEIFKLRRVKLLGRTIDLRTLI
TQRMNKLFRENIDFLFDRFENQDLCAIVELQLLLDMLKLTHQFLSKHLEIDSFSLILNEM
QENLSLVSFSSRLASQIWAEMQNDFLPNFLLCNTTQRFVRSLKGPRQAIQRMDTPVPKPY
FYCGSQELNLAYQSLAGLYSEFFGIPHMTAIVKLVGSRSLPWIIRALLDHIATKITSVAP
KIAGLQEVLPKSIGLLPFDGGIAGCQRIVHEQLTWGTKSELKAEVLHGLKEVGSAIYWMG
LLDLVLREVDTTQFMQTVPWLGMIPGSDGQVKVAECGNSPIVDLFKFATTAIVHNPVCPN
PSSFKTMSKQAEAAGKKWFTYKDSL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccagtggaagaagccattgctgctctctccaccttctcgttagaggacgag
caaccagatctgcaggggcttgctgttttgatttctactgagagatgcgcgacgaatagc
cctatagaatatggtgatgtttctgcctatcgcttatctttggcggaggatacaaaagca
attaaccagttgaacaccctgattcaagaaggaagggagatggcatctttgctatataca
tatcgcagttgtgtcaaggctcttccacagctgcctgattctatgaagcatagccaacct
gacctgtacctggagacgtatcaagttcttgacttggagatgagtcgattacgtgaaatc
cagcgctggcaagcatctgcagcttctaaactggcagctgacatgcagagattttctagg
ccagaaagactgataaatgggcctacaataactcatttttggtctatgatcaagttgctt
gatgtccttgtgcagcttgatcatttaaaaaatgcgaaagctagcataccaaatgatttt
tcatggtataaaagaacttttacccaagtaagcattcagtggcaggacacagattcaatg
agagaagagttagatgaccttcagatattcttaagcacaaggtgggctattctattgaat
ctgcaagctgagatgtttcgtgccaacactgtagaagatattctgcaagtgcttatagtg
ttctgtgttgagtctttagaattagactttgcacttttgtttcaagagcgccatgcccta
cttcgggttttgccagtacttgtcgtcttggcaacctcatctgagaaagatgcagaatca
ctctatagaaggattaagataaaccgccttattaacatcttcaagaatgatcctgtgatt
cctgcatttccagatcttcatctttctcctgctgcgattctcaaagaactgtcaatgtac
tttccaagtttttccagtcaaactcgtcttcttactcttcctgcaccgcatgaaattcct
ccacgggaaatgcaagattatcagaggcaatatttgattgtaaaccatattggagctatt
cgtgcagagcatgatgatttctctatccgctttgcttcatcgaagaatcagatggtgatc
ttaaaatcgacagatggtgcagatagtgattggtccagggaagtcaaaggaaacatgtat
gatattgttgttgaaggttttcagcttcttagcagatggacaggccgagtttgggaacaa
tgtgcttggaaattttcccgcccttgtaaagatccggcttcttttgattcttatgaaagc
tccacaacattttttgattatgagaaggtggtacgttggaactatacaccagatgaaaga
aaagccttattagagcttgtcagttgcataaaaagtgttggttcaatgatgcaacgttgc
gatacactagtagcagatgctttatgggaaaccatccatgtggaggtccaagattttgta
caggataaactggatagcatgttgcggactacttttcgcaaaaagaaagacctatcaagg
attctttctgatatgcgaactctttcagcagattggatggcaaatacaagcaagtctgag
caggagtttcattctctgcatcaagaaaatgaggagaataaacaaaatatgatctttccc
aggccagtggctccaactgttgctcaggtacattgcctgcaattcctgatctgtgagctc
gtttctggtggtaatttaaggaaacctggaggactctttggaaacagtgggtcaggaatc
ccgatcgaagacctcaaacaactagagacattcttttacaagctcagctttttccttcat
atactggattatacagcaacaattggcacattaacggatcttggatttctttggtttaga
gaattttatttagaatcttctcgtgtcatccagtttccaattgaatgttctcttccttgg
atgctggtggatcatgtgattgagtctcaagatgctggacttattgaaagtattctgatg
ccttttgatatctataatgactctgctcaacatgcattgactgttctgaaacagcgtttt
ctatatgatgaaattgaagccgaggttgatctgtgttttgatcagcttgttttcaagctc
agtgagattatcttttcatattataaaagatgtgcagctagtgacctacttgatgaatca
ttcctcgctgcctgtgatgatgctgacaaatattcagttaggcctttaagattcaatgag
attttcaagctgagaagagtaaagcttttaggaaggaccattgacttgaggacattaatt
actcaaaggatgaacaaactgttcagggaaaatattgattttctgtttgatcgctttgaa
aaccaagatttatgtgccattgtggaactgcagttgctcttggatatgttgaagctcact
catcagtttctttctaaacatcttgaaatagactcattttctcttatattgaatgagatg
caggagaatctttctcttgtttcattttccagtagacttgcttctcagatttgggcagag
atgcagaatgacttcttaccaaattttctcctttgcaataccacgcaaagattcgtccgg
tctttgaaagggcctcgccaagctattcaaagaatggatactccagttcctaagccttat
ttctactgtggatctcaggagttgaacttggcttaccaaagtttggctggattatattct
gagttctttggaattccccacatgactgcaattgtcaaacttgtgggatccagatcatta
ccctggattattcgtgctttactagaccatattgcgaccaagattacatcagttgctcct
aaaattgctggattgcaagaagtgctgccaaaatcaattgggcttcttccatttgatggt
ggtatagcaggttgtcaaagaattgttcatgagcagcttacctggggcacaaagtcggaa
cttaaggcagaagtacttcatggtctgaaggaagtagggagtgcaatttactggatgggc
ctccttgaccttgttctcagagaagttgacacaacacagttcatgcagacggtcccatgg
ttaggaatgattcctggatcagatggacaagtaaaagttgctgagtgtggcaatagcccc
attgttgatttgttcaaatttgctactactgcaattgttcacaatcctgtctgtcctaat
ccatcatcatttaaaacaatgtcaaaacaagcagaagctgctggtaagaaatggttcact
tacaaagatagcctatag
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